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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87034.1
DDBJ      :             glycosyl transferase
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  301/915 : Eukaryota  10/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:393 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   74->341 3c48A PDBj 6e-12 25.5 %
:RPS:PDB   20->391 3c48A PDBj 1e-36 19.0 %
:RPS:SCOP  23->388 2iv7A1  c.87.1.8 * 1e-36 12.9 %
:HMM:SCOP  23->392 1rzuA_ c.87.1.8 * 4.7e-59 29.4 %
:RPS:PFM   205->363 PF00534 * Glycos_transf_1 2e-21 40.9 %
:HMM:PFM   204->350 PF00534 * Glycos_transf_1 1.2e-28 32.0 147/172  
:BLT:SWISS 104->330 Y1178_METJA 3e-13 29.2 %
:BLT:SWISS 302->393 PIMA_MYCLE 7e-04 27.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87034.1 GT:GENE AAK87034.1 GT:PRODUCT glycosyl transferase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1226090..1227271) GB:FROM 1226090 GB:TO 1227271 GB:DIRECTION - GB:PRODUCT glycosyl transferase GB:PROTEIN_ID AAK87034.1 GB:DB_XREF GI:15156282 LENGTH 393 SQ:AASEQ MYANASSENGAVNVSDDGPPLRIIHCFRSPVGGVFRHVRDLIEEHVRQGHKVGIVCDSSTGGAHEERLFAQITPMLELGLTRLPIRRSISPGDLLALWKSYKHIKSLRPDILHGHSAKGGALARLIGSLLRANRYRVARLYSPHGGSLHYARNSLKGQLFLRLERFQEHFTDALCFVCNFEQETYETKVGKPRTRTAMIYNGVQESEFETVPPRDGAARFLYIGMLRDLKGPDVFIRAFAKMERSIGQPMSGVIVGDGPDRDKYAAMIATAGLSRRISMHAAMPARQAFELATTVVVPSRAEAMPYIVLEALAAGKTVIASHVGGIPEVLGEDSEALVPAGDADALARTMVKDAADADWAQRVMPHPDSFKAKFSTPVMADEMMKLYRDLLTT GT:EXON 1|1-393:0| BL:SWS:NREP 2 BL:SWS:REP 104->330|Y1178_METJA|3e-13|29.2|202/351| BL:SWS:REP 302->393|PIMA_MYCLE|7e-04|27.5|91/374| BL:PDB:NREP 1 BL:PDB:REP 74->341|3c48A|6e-12|25.5|259/399| RP:PDB:NREP 1 RP:PDB:REP 20->391|3c48A|1e-36|19.0|369/399| RP:PFM:NREP 1 RP:PFM:REP 205->363|PF00534|2e-21|40.9|154/165|Glycos_transf_1| HM:PFM:NREP 1 HM:PFM:REP 204->350|PF00534|1.2e-28|32.0|147/172|Glycos_transf_1| GO:PFM:NREP 1 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00534|IPR001296| RP:SCP:NREP 1 RP:SCP:REP 23->388|2iv7A1|1e-36|12.9|349/370|c.87.1.8| HM:SCP:REP 23->392|1rzuA_|4.7e-59|29.4|361/477|c.87.1.8|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 506 OP:NHOMOORG 340 OP:PATTERN 11---------1----11------2--1----1--12221112-1-2---11211111123------- -23-111----1-1111---------------1---1111-1--1-11--------1-------11-1-2----------1--1------1--1-1-------111--1----------------12132--11-124476---314224431----121----113521---1----1----11--1-111--11111--111-1----1----12--221--2------44-111-1111111111-111----------1113-----1--------------------------------------------2------11--1---------1-------------1-1311-321-13211-2----7-2111------1-21311111113----------1-11221144131-211223311122111--1111122212---------111--------------------------------------------1--111-------11------2-231-2-----3--11--212-2-12--2-2-------113224--1----41212221-2--4121-11121111--------------------11------1--21211---------1--------------222-----------1---11--2--3--1-----1-111-------------111----------------1---1---1--------------------------1141----1-1---------1111111---21----112--1111---------------12-11111---11--------------------------------1-------------------------------11-1--1-- --11-------------------------------------------------------------------1----1--11---------------111---------------------------------------------------------------------------------------------1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 378 STR:RPRED 96.2 SQ:SECSTR #############EcTTccccEEEEEccTTcccHHHHHHHHHHHHHHTTcEEEEEEEcccGGGccEEEEETTEEEEcccccccccGGGGGGGHHHHHHHHHHHHHHHTccccEEEEEHHHHHHHHHHHHHHHHHTccEEEEccccHHHHcccccHHHHHHHHHHHHHHHHccEEEEccHHHHHHHHHHHcccGGGEEEccccccTTTcccccHHcccEEEEEEccccGGGcHHHHHHHHHHHHHHcTTcccEEEEEEcccccHHHHHHHHTTcTTTEEEEccccHHHHHHHccEEEEccccccccHHHHHHHHTTccEEEEccTTHHHHcccTTEEEEccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH## DISOP:02AL 1-20| PSIPRED cccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEEEccccccccccccccccEEEEcccEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHccccccEEEEEcccccHHccccHHHHHHHHHHHHHHHHcccEEEEEcHHHHHHHHHHHccccccEEEEEccccHHHccccccccccEEEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHcccccEEEEEccccHHHHHHHccEEEEccccccccHHHHHHHHccccEEEEcccccHHHcccccEEEEccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHcc //