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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87091.1
DDBJ      :             MFS permease
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  261/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:391 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  230->380 1pv6A  f.38.1.2 * 8e-08 20.7 %
:HMM:SCOP  4->390 1pv7A_ f.38.1.2 * 9.9e-48 26.1 %
:RPS:PFM   43->308 PF07690 * MFS_1 3e-06 30.4 %
:HMM:PFM   27->240 PF07690 * MFS_1 1.5e-21 26.2 214/353  
:HMM:PFM   215->386 PF07690 * MFS_1 3.7e-16 22.9 170/353  
:BLT:SWISS 97->354 YFKF_BACSU 6e-26 27.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87091.1 GT:GENE AAK87091.1 GT:PRODUCT MFS permease GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1289333..1290508) GB:FROM 1289333 GB:TO 1290508 GB:DIRECTION - GB:PRODUCT MFS permease GB:PROTEIN_ID AAK87091.1 GB:DB_XREF GI:15156351 LENGTH 391 SQ:AASEQ MSQMKCEEADAIHWPSLIAAISAISAVGVAIGLGLPLLSIILEKRGISSTMIGVNSAMAGVAAMMAAPVTTKIAHDFGVARTMLLAVVISALSALCFYFADAFWMWFPLRIVFHGATTTLFILSEYWINTTAPPKKRGMVLGIYATGLAVGFAVGPLLFSVVGSEGILPFIVGAAIILLAAIPIFMARGESPELDEHPNHHFIRYVWLVPMASAAAFVFGSVQAGGLSLFPIYATREGFNESQAALLLTVMGIGNMVFQIPIGLLSDRLKDRRTLLALMAFAGVCGTLALPLLVDSWILVAALLLFWGGLVSGMYTVGLTHLGSRLKGADLVSANAAFIFCYAMGTIAGPQAVGISMDVAGTDGFAWALAVFFGLYVVLYGFRFVFRAKQA GT:EXON 1|1-391:0| BL:SWS:NREP 1 BL:SWS:REP 97->354|YFKF_BACSU|6e-26|27.4|252/391| TM:NTM 11 TM:REGION 16->38| TM:REGION 50->72| TM:REGION 79->101| TM:REGION 106->128| TM:REGION 140->162| TM:REGION 168->189| TM:REGION 208->230| TM:REGION 243->265| TM:REGION 284->306| TM:REGION 333->355| TM:REGION 365->387| SEG 18->42|iaaisaisavgvaiglglpllsiil| SEG 57->67|amagvaammaa| SEG 84->95|llavvisalsal| SEG 174->184|aaiillaaipi| RP:PFM:NREP 1 RP:PFM:REP 43->308|PF07690|3e-06|30.4|260/347|MFS_1| HM:PFM:NREP 2 HM:PFM:REP 27->240|PF07690|1.5e-21|26.2|214/353|MFS_1| HM:PFM:REP 215->386|PF07690|3.7e-16|22.9|170/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 230->380|1pv6A|8e-08|20.7|150/417|f.38.1.2| HM:SCP:REP 4->390|1pv7A_|9.9e-48|26.1|380/417|f.38.1.2|1/1|MFS general substrate transporter| OP:NHOMO 333 OP:NHOMOORG 261 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------1--------------21-----------------------11111111111111111-111111111111--11111111-1----------------------------------------------------------------------------------------------------------11-------------------------------------1-1--111-----------22222222222-11111111133-32233344326422--21111111132111111111---1--1-----------------------------1---1-11111111111111111111111111111--------------------1-----------------------1----------------------------------1111-1----------------11--1-211-2-------1----1111-11---11-1------1-22-211111111111-111111111111111111112111212----------------21-11111------------------11-11------1111--1---------------------1-1111323123333-111111111111-1---11-11--111--11111111--------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-12, 188-204, 389-391| PSIPRED cccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //