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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87154.1
DDBJ      :             two component sensor kinase
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  795/915 : Eukaryota  42/199 : Viruses  0/175   --->[See Alignment]
a.26.1a.30.2c.23.1d.110.3d.122.1
:861 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   477->701 3d36B PDBj 1e-21 36.1 %
:BLT:PDB   756->861 3jteA PDBj 2e-11 30.2 %
:RPS:PDB   106->467 3caxA PDBj 6e-14 7.1 %
:RPS:PDB   539->849 2ch4A PDBj 2e-35 18.4 %
:RPS:SCOP  84->124 1s66L  d.110.3.2 * 2e-04 14.6 %
:RPS:SCOP  96->207 1p97A  d.110.3.7 * 1e-07 10.3 %
:RPS:SCOP  201->315 2veaA3  d.110.3.9 * 4e-04 10.8 %
:RPS:SCOP  338->427 2oolA2  d.110.3.9 * 9e-06 17.2 %
:RPS:SCOP  415->536 1csgA  a.26.1.2 * 2e-10 11.8 %
:RPS:SCOP  534->706 1bxdA  d.122.1.3 * 5e-26 25.2 %
:RPS:SCOP  752->858 1a0oA  c.23.1.1 * 4e-17 32.4 %
:HMM:SCOP  89->202 1ll8A_ d.110.3.5 * 4.8e-10 27.1 %
:HMM:SCOP  200->327 1nwzA_ d.110.3.1 * 1.5e-05 17.9 %
:HMM:SCOP  345->461 1p97A_ d.110.3.7 * 1.9e-08 25.7 %
:HMM:SCOP  455->541 2c2aA1 a.30.2.1 * 2e-08 23.0 %
:HMM:SCOP  535->708 1gkzA2 d.122.1.4 * 8.2e-47 42.4 %
:HMM:SCOP  737->858 1s8nA_ c.23.1.1 * 2.2e-32 40.3 %
:RPS:PFM   89->191 PF00989 * PAS 4e-04 26.8 %
:RPS:PFM   473->535 PF00512 * HisKA 1e-04 39.7 %
:RPS:PFM   584->701 PF02518 * HATPase_c 6e-19 47.6 %
:RPS:PFM   756->854 PF00072 * Response_reg 2e-14 44.8 %
:HMM:PFM   583->702 PF02518 * HATPase_c 1.9e-26 40.0 105/111  
:HMM:PFM   742->853 PF00072 * Response_reg 1.3e-22 40.9 110/112  
:HMM:PFM   346->459 PF08448 * PAS_4 9.2e-08 24.8 109/110  
:HMM:PFM   89->196 PF00989 * PAS 1e-07 26.0 100/113  
:HMM:PFM   222->265 PF00989 * PAS 0.00044 27.9 43/113  
:HMM:PFM   475->537 PF00512 * HisKA 5e-09 28.6 63/68  
:BLT:SWISS 182->312 GLMU_METCA 2e-04 37.1 %
:BLT:SWISS 453->858 LOVHK_PSE14 9e-56 36.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87154.1 GT:GENE AAK87154.1 GT:PRODUCT two component sensor kinase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1355121..1357706 GB:FROM 1355121 GB:TO 1357706 GB:DIRECTION + GB:PRODUCT two component sensor kinase GB:PROTEIN_ID AAK87154.1 GB:DB_XREF GI:15156426 LENGTH 861 SQ:AASEQ MTRVRETSDNDLPLVDRRARSGTVLRILLLALVLIAAAAAFVYFKDSLENEIVLGILGVLAMMGIFFLVSSIIGFIEVMPQSQSDGLARRFLSAHPEGTLITDAKGHMVYANATYCRMSGTTKASDIQSLETLLSRSRESTEALYRLINVLREGRDGYEEFRLLKPLGDDTGAGPHWYRLKGRVLKDAGGEGLHVFQIADITPEREDQERFFRELQNAIDYLDHAPAGFFSASRKGEIVYLNATLSEWLGIDLAQFSPGSMTISDIVAGEGMALIDSVHPQGTAKRTEILDLDMRRVNGQSMPARLVHQVTAKDGAPGESRTIVLMRSKGQEDTESSSAMRFTRFFNNTPMAIASLDGEGRILRINAPFLKLFSGVVGRDDIDRGVALETVLHDNEKPRLEQALAEAKDRQGDIAPFDSRHPSDEGRHFRFYVNAVIDQDDEAPEEVAIVYAIEVTEQKALETQMAQTQKMNAVGTLAGGIAHDFNNVLTAILLSSDHLLLQARPADPSFADLMEIKRNANRAAVLVRQLLAFSRKQTMRPAVLNLTDVIGDLRMLVDRLISGTNVKLEVDYGRDLWPVKTDLSQFEQVLINLCVNARDAMPDGGKITIRTRNVDEKEIAALGRPEFPAEDMVMVEVADNGTGIPPEIMDKIFEPFFTTKEVGKGTGLGLSMVYGIVKQSGGYIYPESEVGKGTAFRIYLPRHVVEVVQVMGQDGEMVAAPVVAAEPVKEEPLDLTGKSAVVLLVEDEEAVRRGGKRMLETRGYTVHEAGSGIEALEVMEELEGKVDIVVSDVVMPEMDGPSLLRELRKSYPDLKFIFVSGYAEDAFARNLPADAKFGFLPKPFSLKQLAIAVREMLDDKE GT:EXON 1|1-861:0| BL:SWS:NREP 2 BL:SWS:REP 182->312|GLMU_METCA|2e-04|37.1|105/461| BL:SWS:REP 453->858|LOVHK_PSE14|9e-56|36.7|384/534| TM:NTM 2 TM:REGION 22->44| TM:REGION 55->77| SEG 24->40|vlrilllalvliaaaaa| SEG 129->142|sletllsrsreste| SEG 716->732|emvaapvvaaepvkeep| SEG 740->751|avvllvedeeav| BL:PDB:NREP 2 BL:PDB:REP 477->701|3d36B|1e-21|36.1|205/221| BL:PDB:REP 756->861|3jteA|2e-11|30.2|106/126| RP:PDB:NREP 2 RP:PDB:REP 106->467|3caxA|6e-14|7.1|337/355| RP:PDB:REP 539->849|2ch4A|2e-35|18.4|293/320| RP:PFM:NREP 4 RP:PFM:REP 89->191|PF00989|4e-04|26.8|97/112|PAS| RP:PFM:REP 473->535|PF00512|1e-04|39.7|63/69|HisKA| RP:PFM:REP 584->701|PF02518|6e-19|47.6|103/112|HATPase_c| RP:PFM:REP 756->854|PF00072|2e-14|44.8|96/111|Response_reg| HM:PFM:NREP 6 HM:PFM:REP 583->702|PF02518|1.9e-26|40.0|105/111|HATPase_c| HM:PFM:REP 742->853|PF00072|1.3e-22|40.9|110/112|Response_reg| HM:PFM:REP 346->459|PF08448|9.2e-08|24.8|109/110|PAS_4| HM:PFM:REP 89->196|PF00989|1e-07|26.0|100/113|PAS| HM:PFM:REP 222->265|PF00989|0.00044|27.9|43/113|PAS| HM:PFM:REP 475->537|PF00512|5e-09|28.6|63/68|HisKA| GO:PFM:NREP 8 GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00989|IPR013767| GO:PFM GO:0000155|"GO:two-component sensor activity"|PF00512|IPR003661| GO:PFM GO:0007165|"GO:signal transduction"|PF00512|IPR003661| GO:PFM GO:0016020|"GO:membrane"|PF00512|IPR003661| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| RP:SCP:NREP 7 RP:SCP:REP 84->124|1s66L|2e-04|14.6|41/119|d.110.3.2| RP:SCP:REP 96->207|1p97A|1e-07|10.3|107/114|d.110.3.7| RP:SCP:REP 201->315|2veaA3|4e-04|10.8|102/117|d.110.3.9| RP:SCP:REP 338->427|2oolA2|9e-06|17.2|87/110|d.110.3.9| RP:SCP:REP 415->536|1csgA|2e-10|11.8|119/120|a.26.1.2| RP:SCP:REP 534->706|1bxdA|5e-26|25.2|151/161|d.122.1.3| RP:SCP:REP 752->858|1a0oA|4e-17|32.4|102/128|c.23.1.1| HM:SCP:REP 89->202|1ll8A_|4.8e-10|27.1|107/114|d.110.3.5|1/3|PYP-like sensor domain (PAS domain)| HM:SCP:REP 200->327|1nwzA_|1.5e-05|17.9|123/0|d.110.3.1|2/3|PYP-like sensor domain (PAS domain)| HM:SCP:REP 345->461|1p97A_|1.9e-08|25.7|113/0|d.110.3.7|3/3|PYP-like sensor domain (PAS domain)| HM:SCP:REP 455->541|2c2aA1|2e-08|23.0|87/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 535->708|1gkzA2|8.2e-47|42.4|158/193|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| HM:SCP:REP 737->858|1s8nA_|2.2e-32|40.3|119/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 8032 OP:NHOMOORG 857 OP:PATTERN -----------------------31----1-3---1-122223-9-123CE29--------------8 Kh*13221112312--1----3--23-----141111244175421---31-232111----A-5143541-111111118-21-346KJRF-P221--63E26AUKXEF----------1111277-2416CIR3UbZbZE7Aa1dFRdHI73655211322385L***H2111222221-2B8333342AE7EEFDGGHG9HFJKJDAA77A7IIK6DC63DA433333RR444444444444444411-112213212121222222212342122333143311122222222222111111111211111122111125J77L77766773638A88468467E-1873B6HHLHB627744463212TOPKEEI33333FGdWVH8DQSLKP55564555549-gYfXUXkjDNH1DIIFQOBRXRIGJM86999HBCBB8DA6666666645548YDI22222111111111111111111111111-38H6245439JFGFHGB99A9FEIQCBBB6CDGKEDEG23FF8HCE56EDAK8578J6888E51111112338IOdN**WMLiT6prcac3*l*ulmuFhZWfc**Qn5-521---------------A832455752EAIB7F9AA65655997888B77C8HG--19D79------65622357778788867-7787787766786677775757232345444445555455544866455582-344555533555--13-----534555K49111----------132333323131A6GGHGDKMMBHGIKNJKK---1-11--5365BEFEEFBE9CC87DDDDC89A432311I3NNEGHH21-1121211--------------------------57344434444k1 ----23--------7-2--11221121----------1-1-11---21-11----1------1------------------------1----2-----1-21-11--1-91-----------------------------------------------2-----------1------1-3----17--71-1--4---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 781 STR:RPRED 90.7 SQ:SECSTR ################################################################################HHHTTccGGGcccTTcccccEEEcTTcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHTHHHHTHHHHHHHHTHHHHHTTTcHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHcHHGGGTcccccccccccccTTcccccGGGccccccHHHHHHccHHHHHHTTTcccccccccccccEEccccEEcHHHHHHHHHHcccEEEEEcTTccEEEGGGHHHHHHHcccccccHHHHHHHHHHTTcccccccHHHHHccccHHHHHHEHHHHHHHHHHHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHGGGcccTTcTTTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTcEccEEHEETHHHHTcHHHHHHHHHHTTTccEEEEEcTTcEEETTHHHHTHHHHHHHHHHHHHTTcccHHHHHHTTccccEEEEEEEEEcHHHHHTTcccTTGGGcccHHHHHHTTTcTTTTccccHTcccccHHHHHHHHHHTTcEEEEEEcTTccEEEEEEEEccccEEEEEEEEccccEEEEETTTEEEEEcccTTTEEEEEcHHHHHHTTcEEccccEEEEccccEEEEEEHHHHTTccccccccccEEEEEEETTEEEEEEEcEEEEEEEEEEEccccccTTTTcccEEEEEEcTTccEEEEEcTTTcHHHTccEEcETT DISOP:02AL 1-8, 75-88, 501-510, 860-861| PSIPRED cccccccccccccEEEccccccHHHHHHHHHHHHHHHHHHHEEEccccccEEEHHHHHHHHcccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccEEEccHHHHHHHcccHHHHcccccHHcccccccHHHHHHHHHHHHHcccccccEEEEEEccccccccEEEEEEEEEEEEcccccEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccEEEEcHHHHHHHcccHHHHccccccHHHccccccHHHHHHHHHHHcccccEEEEEEEEEEcccEEEEEEEEEEEEEccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccEEEEcHHHHHHHccccccHHHcccccHHHHccccHHHHHHHHHHHHHHccccEEEEEEEEEcccccEEEEEEEEEEEEcccccEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEcHHHHHHHHHHHHHHHHHHcccEEEEEEcccccEEEEcHHHHHHHHHHHHHHHHHHcccccEEEEEEEEEcccccHHccccccccccEEEEEEEEccccccHHHHHHHccccEEEcccccccccHHHHHHHHHHHcccEEEEEEEccccEEEEEEEEccccccccccccccccHHHHHccccHHHHHcccccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccccEEEEccccccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHccc //