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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87194.1
DDBJ      :             ABC transporter, membrane spanning protein
Swiss-Prot:             

Homologs  Archaea  32/68 : Bacteria  549/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:277 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   66->277 2r6gG PDBj 1e-17 29.4 %
:RPS:SCOP  17->277 2r6gG1  f.58.1.1 * 1e-24 24.9 %
:HMM:PFM   84->271 PF00528 * BPD_transp_1 6.7e-16 23.8 160/185  
:BLT:SWISS 17->277 YCJP_ECOLI 1e-29 30.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87194.1 GT:GENE AAK87194.1 GT:PRODUCT ABC transporter, membrane spanning protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1396509..1397342) GB:FROM 1396509 GB:TO 1397342 GB:DIRECTION - GB:PRODUCT ABC transporter, membrane spanning protein GB:PROTEIN_ID AAK87194.1 GB:DB_XREF GI:15156472 LENGTH 277 SQ:AASEQ MMNTTGNAHFVRILAVLFMLGFAAFPIYWMFVTSMTPSSELFAPFPRLVPDWSQLGIYLEVFDTIPVTTWLKNSFLVATGTTVLSILLAVLPAYALSRFRFAGLAILGFALFATQMLPEAMLVVPLYSIFGDLNLLNTIPGLVLANTAFVVPVITWIIKGAIDGIPIEIEEAARVDGCSRLDIVLGIIIPLIAPTLAAAAVISFFHGWNEYVFAQTLISSENLRTASVGLASFVGELSTPIHSVMAVGVIYTLPAIVFYLFAQRYVVAGMTAGSVKG GT:EXON 1|1-277:0| BL:SWS:NREP 1 BL:SWS:REP 17->277|YCJP_ECOLI|1e-29|30.4|257/280| TM:NTM 7 TM:REGION 10->32| TM:REGION 75->97| TM:REGION 105->127| TM:REGION 144->166| TM:REGION 182->204| TM:REGION 225->247| TM:REGION 253->275| SEG 99->113|frfaglailgfalfa| SEG 187->202|iiipliaptlaaaavi| BL:PDB:NREP 1 BL:PDB:REP 66->277|2r6gG|1e-17|29.4|211/284| HM:PFM:NREP 1 HM:PFM:REP 84->271|PF00528|6.7e-16|23.8|160/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 17->277|2r6gG1|1e-24|24.9|261/284|f.58.1.1| OP:NHOMO 2872 OP:NHOMOORG 584 OP:PATTERN 33--42112323333161111---7--41-3-----------------------34531-1332---- ---1c213334-1123344-423349444443255514565226KzU29EF5NJN129--4389D4DJXH47666FC9----4-------------------------1---------------------------9AA77---76221311---222112212221333--1-----1----EC265BE-953222222331122222QE994722353818454454449*111111111111111-----321111--12122--22---1-41232323233311444555544443222233332222233---333393-19222222242482--1333N-14223B--231--1J--1766C2-1---------1--2-DBA1--535534465466566C---6--4-17P--VVVJWTQheZWR22---8F97758D64--------4112--12-----------------------------2---2-133326776665233344894443336562223--2234-22231658E----1--3--------------1-1--111--1-------------222224----------1------------------125-----1-4----------------------1---------26561413333333333-33333334333323333324545511123222222222222226-113332--488888888888---------11111-86C111111-----1--1----------1-22221233412133545----------1222222223154411111111111111-------------------14----1-----1-----1---1----5LEA7AS9EB-1- -------------2------------------------------------------------------------------------------------------------------------------------------------------------2-----------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 212 STR:RPRED 76.5 SQ:SECSTR #################################################################cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTcHHHHHHHHHTTccccccHHHHHHHHHHHHHHTTcHHHHHHHHTTTTHHHHHHHHHHHHTTccTHHHHHHHHTTccHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTccHHHHHHcccGGGccHHHHGGGGcccccccHHHHHHHHHHTHHHHHHHHHHHTTTccccccTTTccc DISOP:02AL 1-5| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccc //