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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87198.1
DDBJ      :             isomerase/lactonizing enzyme
Swiss-Prot:             

Homologs  Archaea  23/68 : Bacteria  255/915 : Eukaryota  64/199 : Viruses  0/175   --->[See Alignment]
c.1.11d.54.1
:400 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->396 2podA PDBj e-109 54.9 %
:RPS:PDB   11->390 1ec7B PDBj 3e-48 14.6 %
:RPS:SCOP  20->110 1rvkA2  d.54.1.1 * 1e-21 28.4 %
:RPS:SCOP  113->390 2gdqA1  c.1.11.2 * 8e-44 20.5 %
:HMM:SCOP  1->109 1ec7A2 d.54.1.1 * 5.6e-32 42.1 %
:HMM:SCOP  97->390 2gl5A1 c.1.11.2 * 1e-64 34.1 %
:RPS:PFM   10->109 PF02746 * MR_MLE_N 9e-12 44.2 %
:RPS:PFM   163->266 PF01188 * MR_MLE 8e-07 29.7 %
:HMM:PFM   13->109 PF02746 * MR_MLE_N 3.1e-20 35.2 91/117  
:HMM:PFM   164->266 PF01188 * MR_MLE 1.6e-16 27.8 90/98  
:BLT:SWISS 1->383 DGOD_ENTS8 1e-44 37.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87198.1 GT:GENE AAK87198.1 GT:PRODUCT isomerase/lactonizing enzyme GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1400578..1401780 GB:FROM 1400578 GB:TO 1401780 GB:DIRECTION + GB:PRODUCT isomerase/lactonizing enzyme GB:PROTEIN_ID AAK87198.1 GB:DB_XREF GI:15156476 LENGTH 400 SQ:AASEQ MKITSVETLRTEEFSNVLWVRIHTDAGVIGLGETFYGAGAVEAHIHDVLAGRLLGRDPMRIEAHSRELVNLPMAQASTGAEYRAASAIDLALWDIFGKVCNQPVHQMLGGLCHDRIPVYNTCAGYGYVRSNKIKPVDTWNFRDDAEGPYEDLRAFMTDAGALAENLLEQGISAMKIWPFDPAAIENDGRYITSEQLRAALLPFEQIRKRVGDRMQIMVEFHSLWNLPTIKKIARELEAFDPTWYEDPIRMNSVSALSELAASTSVPICASETLGSRFPYKDMLEAGAIGIVMTDLVWTGGLTEGRKIAALADTYHRPYAPHDCTGPVAYAAAVHSSFSQTNTMIQESVRAFYTGWYCELVTNLPVIENGFVLPMEGPGLGTELLPKVFERPDLTVRVSTL GT:EXON 1|1-400:0| BL:SWS:NREP 1 BL:SWS:REP 1->383|DGOD_ENTS8|1e-44|37.9|338/382| BL:PDB:NREP 1 BL:PDB:REP 1->396|2podA|e-109|54.9|368/371| RP:PDB:NREP 1 RP:PDB:REP 11->390|1ec7B|3e-48|14.6|363/440| RP:PFM:NREP 2 RP:PFM:REP 10->109|PF02746|9e-12|44.2|95/110|MR_MLE_N| RP:PFM:REP 163->266|PF01188|8e-07|29.7|91/98|MR_MLE| HM:PFM:NREP 2 HM:PFM:REP 13->109|PF02746|3.1e-20|35.2|91/117|MR_MLE_N| HM:PFM:REP 164->266|PF01188|1.6e-16|27.8|90/98|MR_MLE| RP:SCP:NREP 2 RP:SCP:REP 20->110|1rvkA2|1e-21|28.4|88/126|d.54.1.1| RP:SCP:REP 113->390|2gdqA1|8e-44|20.5|239/256|c.1.11.2| HM:SCP:REP 1->109|1ec7A2|5.6e-32|42.1|107/0|d.54.1.1|1/1|Enolase N-terminal domain-like| HM:SCP:REP 97->390|2gl5A1|1e-64|34.1|261/0|c.1.11.2|1/1|Enolase C-terminal domain-like| OP:NHOMO 845 OP:NHOMOORG 342 OP:PATTERN ------1366665753-3-----141151151-----------------------------132---- 11G-3--1-----------------3------------221--1381-1---345--1----1-3173612----2------4------------------------8-1-----------------------------31----7--------------1----------------------11-------1-11111-11-111--11-11-1111-11-1--------251---------------------------1------1----------------------------------------------------------2----------------------------1---------11-1------2221-------311--------11111111113---1--41-AB--566-83299754111--11---33223---------11------------------------------------1211-2113422223222221174322211415433--1111--1--418175-----------------------11-----------------------------------------------------------1-11-41--------2------2-----------------1254-4-2--2233332--223423333-3222222423265---52645365543454352---222-------------------11111-------51-----------------1-------211111-112---1--221------------1----------1--22222122--------------------------------------------------------------- ------1--------123333335555111111112-------1113334337433322122-11-------211--------------1222-1-222------1--1---1--1-----------------------------------------------11-----------------------23---1----2 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 399 STR:RPRED 99.8 SQ:SECSTR ccEEEEEEEEcccEEEEEEEEEEETTTEEEEEEEEccHHHHHHHHHHHHHHHHTTccGGGHHHHHHHHHHHTGGGccccccccHHHHHHHHHHHHHHHHHTccGGGGcTcccccEEEccEEEcccccGGGccccHHHHcccccccTTcccHHHHHTTcccccHHHHHHHHHHHHHHHccccEEEEcTTcEcccccHHHHHHHHHHHHHHcTTcccEEEEcTTcccHHHHHHHHHHTTTTccccEEccccccTTccHHHHHHHHcccEEEccccccHHHHHHHHHHTcccEEcccHHHcHcHHHHHHHHHHHHHHTccccccccccHHHHHHHHHHHHTcccccccccccHHHHTTTcccccccccEETTEEEccccccTcccccHHHHHHcccccEEEc# DISOP:02AL 399-400| PSIPRED cccEEEEEEEEcccccEEEEEEEEccccEEEEEccccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccHHHHccccccccEEEEEEEEccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHccccEEEccccccHHHHHHHHHHccccEEEcccHHcccHHHHHHHHHHHHHccccEEEccccHHHHHHHHHHHHHHccccccccccccccHHHHHHHcccccEEEccEEEccccccccccccHHHHHcccccEEEEcc //