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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87203.2
DDBJ      :             ABC transporter, nucleotide binding/ATPase protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  899/915 : Eukaryota  146/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:590 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   342->587 1g6hA PDBj 1e-38 32.5 %
:RPS:PDB   342->587 2d3wB PDBj 9e-40 19.1 %
:RPS:SCOP  342->588 1b0uA  c.37.1.12 * 3e-43 23.9 %
:HMM:SCOP  339->592 1g6hA_ c.37.1.12 * 2.1e-66 37.0 %
:RPS:PFM   55->300 PF02653 * BPD_transp_2 2e-09 30.3 %
:RPS:PFM   382->517 PF00005 * ABC_tran 3e-07 30.1 %
:RPS:PFM   566->587 PF12399 * BCA_ABC_TP_C 6e-04 63.6 %
:HMM:PFM   32->300 PF02653 * BPD_transp_2 4.7e-39 28.6 262/267  
:HMM:PFM   382->516 PF00005 * ABC_tran 4.8e-21 32.2 115/118  
:HMM:PFM   566->587 PF12399 * BCA_ABC_TP_C 1.2e-12 59.1 22/23  
:HMM:PFM   358->402 PF03193 * DUF258 0.00015 29.5 44/161  
:BLT:SWISS 55->319 BRAE_PSEAE 2e-06 26.2 %
:BLT:SWISS 341->589 LIVG_SALTY 1e-50 42.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87203.2 GT:GENE AAK87203.2 GT:PRODUCT ABC transporter, nucleotide binding/ATPase protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1405012..1406784) GB:FROM 1405012 GB:TO 1406784 GB:DIRECTION - GB:PRODUCT ABC transporter, nucleotide binding/ATPase protein GB:PROTEIN_ID AAK87203.2 GB:DB_XREF GI:159140036 LENGTH 590 SQ:AASEQ MTLGKHLYPAVAALFLVAIFPLLPVPPFWVTLANNIGLASLVAIGLVLLTGVGGMTSFGQAAFCGFGAYTTAVLTSAYGFSPWLTLPLSLLVGAVVALPLGLMTVRLSGHYLPLGTIAWGLAIYYLFGRIELLGRYDGISGIPPLSLGGEALMSSSSIYYIIWIFVIAVAIGAQNLLDSRVGRGIRALRGGSQAAEAFGVNIERAKLTVFVFAAVVAALSGWLYAHMQRSINPTPFGLDMGITYMLMAVVGGSGRVVGAIFGASVVLVLKEVLQRVLPGLLGTSVNFEMIVFGVLLVLILQLSRDGLWPLLERYLPARPPRTIRRDGEALDKRPMPQTGSPLVRVDRVRKAFGGLTAVNDVSFDIKAGQIIGLIGPNGAGKSTTFNLITGILNLSGGEVTYQGQRLSGLNPRLIARRGIARTFQHAKVLPTMSVLENVALGAHLRGNAGMFRSFFRLERRQEQALLAEAADQLDRVGLGAHRDRPAGDLALGQIRILEIARALCLNPTLLLLDEPAAGLRHGEKQELADLLKKLRAEGVSVLLVEHDMGFVMGLVDHIVVLDFGTLIAEGKPADIRQHPAVIAAYLGGAA GT:EXON 1|1-590:0| BL:SWS:NREP 2 BL:SWS:REP 55->319|BRAE_PSEAE|2e-06|26.2|256/417| BL:SWS:REP 341->589|LIVG_SALTY|1e-50|42.6|249/255| TM:NTM 9 TM:REGION 5->27| TM:REGION 34->56| TM:REGION 60->82| TM:REGION 86->108| TM:REGION 112->134| TM:REGION 156->178| TM:REGION 206->228| TM:REGION 245->267| TM:REGION 279->301| SEG 41->54|lvaiglvlltgvgg| SEG 86->102|lplsllvgavvalplgl| SEG 154->171|ssssiyyiiwifviavai| SEG 209->218|vfvfaavvaa| SEG 249->258|vvggsgrvvg| SEG 456->475|rlerrqeqallaeaadqldr| BL:PDB:NREP 1 BL:PDB:REP 342->587|1g6hA|1e-38|32.5|246/254| RP:PDB:NREP 1 RP:PDB:REP 342->587|2d3wB|9e-40|19.1|241/244| RP:PFM:NREP 3 RP:PFM:REP 55->300|PF02653|2e-09|30.3|238/271|BPD_transp_2| RP:PFM:REP 382->517|PF00005|3e-07|30.1|123/123|ABC_tran| RP:PFM:REP 566->587|PF12399|6e-04|63.6|22/23|BCA_ABC_TP_C| HM:PFM:NREP 4 HM:PFM:REP 32->300|PF02653|4.7e-39|28.6|262/267|BPD_transp_2| HM:PFM:REP 382->516|PF00005|4.8e-21|32.2|115/118|ABC_tran| HM:PFM:REP 566->587|PF12399|1.2e-12|59.1|22/23|BCA_ABC_TP_C| HM:PFM:REP 358->402|PF03193|0.00015|29.5|44/161|DUF258| GO:PFM:NREP 5 GO:PFM GO:0005215|"GO:transporter activity"|PF02653|IPR001851| GO:PFM GO:0006810|"GO:transport"|PF02653|IPR001851| GO:PFM GO:0016020|"GO:membrane"|PF02653|IPR001851| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 1 RP:SCP:REP 342->588|1b0uA|3e-43|23.9|247/258|c.37.1.12| HM:SCP:REP 339->592|1g6hA_|2.1e-66|37.0|254/254|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 23533 OP:NHOMOORG 1113 OP:PATTERN FF538A55765555A7N4FEEJIJhEGKUCQL52832245644CF6EGB9RKF48ECECCC364G122 DCOF*GDFHIJAGHH98AA-AL44DrBBBBBASQQQUltpIlKtMVOJSNICYVaBDL56UWmGdXbyqtNLFFFPMMG7NES33235AA9727353--245364C8C87222222244333339B96AB77AA76OUTdY888SMIEISFFIKQFF87A886JLJKVSbE8A68656C6766XNPILJH4DKQZZbYbadcPadeaadXMQQPNdbgEWcURKNLKKILI**DFFFFFEFEEFFFEDGEEDCNDDCUSA8CADNN78WUFDADIFEFEKMLMIFJKMMJLHKHGGKJIIJIIIIJKJLJIIJPMKEEELLLLJcQXZSSSWSUVHVHLNJJFJIGYFIHBlDLLHhmHNMPLIEHIBCLHAHC6JCBBB5985BHL***KCY*y**qy*u**r*pwx*-Xb*VR*c***G3**************87Drw**r***m*DCDDDDDDpHK8GTGn2221211111-12322223322222111-B45877p**n*z*****bihic****soqoZq***s**p5DljatUdWc*r****JUS6D4BQJAAAB99ADC8MZZHkiFKLlRJWYRPfAKILFHLGAGJKNJUeHm5AA95AAAA972311111114943277NNZ5QFEA74UADDEEADKCCDDEEJDEGA2-67HAE------kawoOlbaddbbcadZY-dZYbcadbaZecYZYZYYZz*yrrLLHUTSSRUUUTUSSTSSSvUQOVWUWC-kuuvywwrtyyy238455355BBBBDCYUpIGJMCK77978CAEH9ACAA6I6B9YKcbabcknzUkjgbUyqu8775767768JKJNKLLLLLRQQOFEBABAAABA8888129B88555645453454D6C54433-3331363444433333333FJMAEGRHJF7M8 ----663-B933364125212111-1133--111111222222212212322322141322211-------------------------37-2----1----1----2615242124221-35-65271IlB-C574-2262192-211251183343J36A25271A44D3285-133b312-4632N14221H6DH4 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4,319-341,589-591| PSIPRED ccHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccEEEEcccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHcHHHHHHHHHcccccccccccccccccccccccccccccEEEEEcEEEEEccEEEEcccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccHHHHHHcccccccccccccccccHHHHHHHHHHHcccccHHHHHHccccccHHHHHHHHHHHHHHcccHHHcccccHHccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEccHHHHHccHHHHHHHccccc //