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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87204.1
DDBJ      :             ABC transporter, membrane spanning protein
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  296/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
:344 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   9->308 PF02653 * BPD_transp_2 4e-06 32.0 %
:HMM:PFM   10->330 PF02653 * BPD_transp_2 8.5e-21 26.2 260/267  
:BLT:SWISS 12->337 BRAD_PSEAE 4e-20 31.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87204.1 GT:GENE AAK87204.1 GT:PRODUCT ABC transporter, membrane spanning protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1406786..1407820) GB:FROM 1406786 GB:TO 1407820 GB:DIRECTION - GB:PRODUCT ABC transporter, membrane spanning protein GB:PROTEIN_ID AAK87204.1 GB:DB_XREF GI:15156482 LENGTH 344 SQ:AASEQ MDATIATFLIQDGVTNGAIYALLGLAIVLVFSVTRVIFIPQGEFVAHGALTLALLDAGRVPGTLNLLLCMGVVALVLDLWAMRRDMRLPRLLQALAVNLALPGAIYGLVAILAPMQLPSFLRAMITIAIIAPMGYYVYRIAYRPLSDASVLVLLIASVGVHLALMGLGLAFFGPEGLRAAALSDGGFTLGPMLVTAQSIFIYLATILVMIGLYLFFEKTLLGKALKATAINRLGARLVGVRTELTGVTAFVLAAAIAAISGVLIGPITTIFYDTGFLIGLKGFVAAILGGMASFPVTAVAAVGVGLIEAFASFFASDFKEIIVFGLIVPVLIWLSFGASHHEEE GT:EXON 1|1-344:0| BL:SWS:NREP 1 BL:SWS:REP 12->337|BRAD_PSEAE|4e-20|31.6|275/307| TM:NTM 10 TM:REGION 26->48| TM:REGION 61->82| TM:REGION 88->110| TM:REGION 115->137| TM:REGION 148->170| TM:REGION 191->213| TM:REGION 245->267| TM:REGION 269->291| TM:REGION 293->315| TM:REGION 317->336| SEG 162->173|lalmglglaffg| SEG 253->259|aaaiaai| RP:PFM:NREP 1 RP:PFM:REP 9->308|PF02653|4e-06|32.0|244/271|BPD_transp_2| HM:PFM:NREP 1 HM:PFM:REP 10->330|PF02653|8.5e-21|26.2|260/267|BPD_transp_2| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF02653|IPR001851| GO:PFM GO:0006810|"GO:transport"|PF02653|IPR001851| GO:PFM GO:0016020|"GO:membrane"|PF02653|IPR001851| OP:NHOMO 497 OP:NHOMOORG 303 OP:PATTERN -----------------------11---1--1--------------------------------1--- ------------------------------------------1-------------------2----111-1---1------1--------------------------------------------------------21----1--------1----------11----------------3331--------------1-1------------1--431---------3-------------------------11-----11--------------------1-----------------------------------1-2--21111111-1---11----1----1---31112-2-1-1-----11-1-----------15241124246322222122211--121-31211--12211111112236-----1------2--------2----111-----------------------------1-----56633223333-111144222222123444443-111211-2242-134223----1-----------13413611-41231222-2121121-112-1-114---------------------------111-1-1-------------------1-1--------------2111-211111111111-11111111111111111112221111-111111111111111121111111--111111111111---------------1-2-------------------------2122222222222221111--------------------1-------------------1-------------------------------------------------1------ -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 341-344| PSIPRED ccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHEEEEEEcccHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccc //