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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87207.1
DDBJ      :             3-hydroxyacyl-CoA dehydrogenase type II
Swiss-Prot:             

Homologs  Archaea  41/68 : Bacteria  867/915 : Eukaryota  188/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:257 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->256 1e6wD PDBj 9e-60 49.4 %
:RPS:PDB   2->254 1dohB PDBj 5e-29 23.1 %
:RPS:SCOP  3->251 2gdzA1  c.2.1.2 * 5e-33 27.9 %
:HMM:SCOP  1->251 1zemA1 c.2.1.2 * 9.9e-69 49.6 %
:RPS:PFM   8->180 PF00106 * adh_short 5e-07 40.9 %
:HMM:PFM   8->181 PF00106 * adh_short 5.9e-28 31.4 156/167  
:BLT:SWISS 2->256 HCD2_RAT 3e-59 49.4 %
:PROS 150->178|PS00061|ADH_SHORT
:PROS 47->54|PS00687|ALDEHYDE_DEHYDR_GLU
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87207.1 GT:GENE AAK87207.1 GT:PRODUCT 3-hydroxyacyl-CoA dehydrogenase type II GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1410773..1411546) GB:FROM 1410773 GB:TO 1411546 GB:DIRECTION - GB:PRODUCT 3-hydroxyacyl-CoA dehydrogenase type II GB:PROTEIN_ID AAK87207.1 GB:DB_XREF GI:15156487 LENGTH 257 SQ:AASEQ MNIEGAGALVTGAASGLGAAVARMLAARGAAVTIFDRNGEAGKKLAAEIGGKAVQGDVTSDADAQAAIKVAASAKGGLRILVNCAGIGTAGRILGREGPQPLGDFEQVIRVNLIGTFNMMRLAAAHMAEREQDEGQDSRQDNGVIVNTASVAAFEGQIGQAAYAASKGGIVSLALPAARELARFRIRVNTVAPGIFLTPLLQGLPQEVQESLAGQIPHPSRLGDPAEFADTVRFLIENDYMNGEVIRLDGAIRMQPR GT:EXON 1|1-257:0| BL:SWS:NREP 1 BL:SWS:REP 2->256|HCD2_RAT|3e-59|49.4|251/261| PROS 150->178|PS00061|ADH_SHORT|PDOC00060| PROS 47->54|PS00687|ALDEHYDE_DEHYDR_GLU|PDOC00068| SEG 17->32|lgaavarmlaargaav| SEG 62->74|adaqaaikvaasa| BL:PDB:NREP 1 BL:PDB:REP 2->256|1e6wD|9e-60|49.4|251/255| RP:PDB:NREP 1 RP:PDB:REP 2->254|1dohB|5e-29|23.1|238/271| RP:PFM:NREP 1 RP:PFM:REP 8->180|PF00106|5e-07|40.9|159/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 8->181|PF00106|5.9e-28|31.4|156/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 3->251|2gdzA1|5e-33|27.9|229/254|c.2.1.2| HM:SCP:REP 1->251|1zemA1|9.9e-69|49.6|236/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 7546 OP:NHOMOORG 1096 OP:PATTERN --1-1-2553534341-4-1---13113132622---------11-31--31--11----21423111 7AD5L2-4225231JbSCC-CV33NlCBCCCIUadbJa*p2O5rAA653762IAD55611CAK2B9EMKKA-111---1142N11111564514221--53D466G4L1811111111111111232123122212B99AC21185479821311111113211317659311111111111185456441A3D88888A8AA9A8AA8D9BB7B9996CBDH77444543AH4444443344444435774751A246251112544362355664444341434333111111112123344333344434211111111343479444443443452552564333113522255112214333334512528M99E11111C3gKM435JAIIDBDDDABDDDDF-9BJ88T9FISO1QHHAOKLVRXSPFS4E7E8JD6CD75933333333GDC549691111111111112133-21-1221211115BVbC3AOKEHaSSWXTEDCDCNNZYFFFF7FeMbLkYR44EEEG79CBHDJ8LI7873212831111111124G753933311112322314543A336344635B3112111111121121111111112114476638685A7254433369655473644571-2333711-11188A84956775666666-7566656676756556655CED554486445556556445455E4454335116666666666661-1434232776739AIA11131311111123189BB94A467E4CCED7DDI9ABB9EA781111121111334A43443483676798A8866721111132555433--------1-2----------1--------------3232154565272 1111539-721-268GNCECELEROUD8A4856A673C8B8BA9A79BCHHPPPFEB67878236-2--2--43211111244434-4-596N6D79984527CA7-555Z8H8662313236486251BA5-5562334724452432364344334BC963CB65349955A72562F11147AHCYCB967A3325 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 257 STR:RPRED 100.0 SQ:SECSTR TccTTcEEEETTTTcHHHHHHHHHHHHTTcEEEEEEcccHHHHHHHHHHHHHEEEccTTcHHHHHHHHHHHHHHHccccEEEEcccccccccGGGGccHccHHHHHHHHHHHTHHHHHHHHHHHHHccTTccEETcHHHHTcEEEEEccGGGTcccccccHHHHHHHHHHHHHHHHHHHHHGGGTcEEEEEEEcccccHHHHHHGGGGcTTcTTccHHHHHHHHHHHHHHHHHHHGGGTTccccEEEEccccccccc DISOP:02AL 257-258| PSIPRED ccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHcccEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEcccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHcccHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccEEEEccccccccc //