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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87265.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  135/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.79.1
:129 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->129 1pf5A PDBj 1e-62 85.0 %
:RPS:PDB   4->128 2dyyK PDBj 6e-28 33.6 %
:RPS:SCOP  3->129 1pf5A  d.79.1.1 * 3e-41 85.0 %
:HMM:SCOP  2->129 1pf5A_ d.79.1.1 * 1.4e-34 42.2 %
:RPS:PFM   21->128 PF01042 * Ribonuc_L-PSP 7e-13 46.2 %
:HMM:PFM   13->127 PF01042 * Ribonuc_L-PSP 2.6e-33 41.2 114/121  
:BLT:SWISS 1->129 YJGH_ECOLI 1e-62 84.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87265.1 GT:GENE AAK87265.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1468954..1469343 GB:FROM 1468954 GB:TO 1469343 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK87265.1 GB:DB_XREF GI:15156555 LENGTH 129 SQ:AASEQ MTEREAIFPANRHALYEEHGYSAAIRSGDLLFVSGQVGSRADGTPEPDFEQQVRLAFENLKATLAAAGCTFDDIVDVTTFHTDPENQFGTIMTVKQEIFSKSPYPNWTAIGVNWLAGFDFEIKVIARIP GT:EXON 1|1-129:0| BL:SWS:NREP 1 BL:SWS:REP 1->129|YJGH_ECOLI|1e-62|84.5|129/131| BL:PDB:NREP 1 BL:PDB:REP 3->129|1pf5A|1e-62|85.0|127/130| RP:PDB:NREP 1 RP:PDB:REP 4->128|2dyyK|6e-28|33.6|119/123| RP:PFM:NREP 1 RP:PFM:REP 21->128|PF01042|7e-13|46.2|106/119|Ribonuc_L-PSP| HM:PFM:NREP 1 HM:PFM:REP 13->127|PF01042|2.6e-33|41.2|114/121|Ribonuc_L-PSP| RP:SCP:NREP 1 RP:SCP:REP 3->129|1pf5A|3e-41|85.0|127/130|d.79.1.1| HM:SCP:REP 2->129|1pf5A_|1.4e-34|42.2|128/130|d.79.1.1|1/1|YjgF-like| OP:NHOMO 166 OP:NHOMOORG 135 OP:PATTERN -------------------------------------------------------------------- -------------------------1-----------11-1----------------------------1-----------------------------------------------------------------------11-----------------------1-----------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------2--1-------------1--------------2-11-------1--1111111111111--1--2----1-1----------------1-------------------------------111-21111222322-----11-2------41-1331--112----1----1--------------------1-----1---1------------------------------------------------------1---11-------------1---1-1---1-1---------1---1-111-1---11-111111-1-111111111--21-1---1----1-111--1----1111111-----------------------------11-------------------1------1-11-11-3-1----1121------------------------2222222------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 129 STR:RPRED 100.0 SQ:SECSTR HHHcEEEccTTccccccccccccEEEETTEEEEEEEccEETTTTEEccHHHHHHHHHHHHHHHHHTTTccGGGEEEEEEEEcccGGcTTTHHHHHHHHHTTTTccEEEEEEccccGGccEEEEEEEEcc DISOP:02AL 129-130| PSIPRED ccccEEEEcccccccccccccccEEEEccEEEEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHccccHHHEEEEEEEEccHHHHHHHHHHHHHHHccccccccEEEEEccccccccEEEEEEEEEc //