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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87342.2
DDBJ      :             alcohol dehydrogenase
Swiss-Prot:             

Homologs  Archaea  33/68 : Bacteria  605/915 : Eukaryota  169/199 : Viruses  1/175   --->[See Alignment]
b.35.1c.2.1
:355 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   15->349 1uufA PDBj 5e-96 58.6 %
:RPS:PDB   1->346 2cf5A PDBj 1e-52 39.5 %
:RPS:SCOP  6->148,317->349 1uufA1  b.35.1.2 * 1e-29 60.0 %
:RPS:SCOP  163->314 1piwA2  c.2.1.1 * 4e-47 26.3 %
:HMM:SCOP  1->194 1p0fA1 b.35.1.2 * 2e-49 40.1 %
:HMM:SCOP  151->315 1q1nA2 c.2.1.1 * 1e-47 38.2 %
:RPS:PFM   30->145 PF08240 * ADH_N 2e-10 39.8 %
:RPS:PFM   193->304 PF00107 * ADH_zinc_N 2e-08 35.7 %
:HMM:PFM   188->310 PF00107 * ADH_zinc_N 7.4e-30 35.8 123/130  
:HMM:PFM   29->146 PF08240 * ADH_N 5e-29 35.8 106/109  
:BLT:SWISS 1->349 ADHC_MYCTU 2e-97 51.7 %
:PROS 62->76|PS00059|ADH_ZINC
:PROS 181->209|PS00065|D_2_HYDROXYACID_DH_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87342.2 GT:GENE AAK87342.2 GT:PRODUCT alcohol dehydrogenase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1544440..1545507 GB:FROM 1544440 GB:TO 1545507 GB:DIRECTION + GB:PRODUCT alcohol dehydrogenase GB:PROTEIN_ID AAK87342.2 GB:DB_XREF GI:159140097 LENGTH 355 SQ:AASEQ MFTTSAYACDDGSSPMKLATIRRRDPGPRDVEIEIEFCGVCHSDIHTARSEWPGSLYPCVPGHEIVGRVGRVGAQVTRFKTGDRVGVGCIVDSCRECASCAEGLEQYCENGMTGTYNSPDKAMGGGAHTLGGYSAHVVVDDRYVLNIPEGLDPAAAAPLLCAGITTYSPLRHWNAGPGKRVGVVGLGGLGHMAVKLANAMGATVVMITTSPGKAEDAKKLGAHEVIISRDAEQMKKATSSLDLIIDAVAADHDIDAYLALLKRDGALVQVGAPEKPLSVMAFSLIPGRKTFAGSMIGGIPETQEMLDFCAEKGIAGEIEMIDIDQINDAYERMIKSDVRYRFVIDMKSLPRQKAA GT:EXON 1|1-355:0| BL:SWS:NREP 1 BL:SWS:REP 1->349|ADHC_MYCTU|2e-97|51.7|346/346| PROS 62->76|PS00059|ADH_ZINC|PDOC00058| PROS 181->209|PS00065|D_2_HYDROXYACID_DH_1|PDOC00063| SEG 153->162|paaaapllca| SEG 181->190|vgvvglgglg| SEG 244->256|iidavaadhdida| BL:PDB:NREP 1 BL:PDB:REP 15->349|1uufA|5e-96|58.6|326/339| RP:PDB:NREP 1 RP:PDB:REP 1->346|2cf5A|1e-52|39.5|342/352| RP:PFM:NREP 2 RP:PFM:REP 30->145|PF08240|2e-10|39.8|103/108|ADH_N| RP:PFM:REP 193->304|PF00107|2e-08|35.7|112/128|ADH_zinc_N| HM:PFM:NREP 2 HM:PFM:REP 188->310|PF00107|7.4e-30|35.8|123/130|ADH_zinc_N| HM:PFM:REP 29->146|PF08240|5e-29|35.8|106/109|ADH_N| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF08240|IPR013154| GO:PFM GO:0008270|"GO:zinc ion binding"|PF00107|IPR013149| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00107|IPR013149| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00107|IPR013149| RP:SCP:NREP 2 RP:SCP:REP 6->148,317->349|1uufA1|1e-29|60.0|173/178|b.35.1.2| RP:SCP:REP 163->314|1piwA2|4e-47|26.3|152/168|c.2.1.1| HM:SCP:REP 1->194|1p0fA1|2e-49|40.1|182/0|b.35.1.2|1/1|GroES-like| HM:SCP:REP 151->315|1q1nA2|1e-47|38.2|165/0|c.2.1.1|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 3201 OP:NHOMOORG 808 OP:PATTERN 111-1-1766676876-43312--6---2-31------------1---1-11---------2111-33 436-431444421247655-58229G55555788A98BFF153563321421767322--11338296661-----------5-1--------1-----1-1-2-41222--------------1-1---1-----14411---182244222--------1--1-4443-------------311--11-41522222233133222233221322311114-233333223-33333323433334112221-2----3---11221111121311111112222--111111112122222221222222211---111-----4221222111123--1-----1----1--11--1----1---1--25144112-----455664-33523433443443334-44115324233-8774B9AB879A3222232442342233333333326541111------------------------------25122-222-8556576535588695555146883645--11811153324222221-1111-1-1111121411-2211-----------3331-221-439537211----111111111211111-----3411-1112153-12112---211-1---1-1----2--------36141257668789877-68567677666877767733645612-334343533342323453333324--2---1----111---211111322221-461113-1---------2233213-2-4-332322332333232231------------------11---12212113334222---3111111-----------------21--1-------2------1----2-3-222- --11862-21---14BGFECEEEOMLF772666666A968775635BBELFHPPBE883756698356665544A5748655557642-8OCG3C2D89473696C-325642262--1-1-113319-6L5-746----11-3112----1--1-113451-611-114344-825519323238DLRFDG1-UTNH3 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 349 STR:RPRED 98.3 SQ:SECSTR ccEEEEEEEccTTccEEEEEEEcccccTTEEEEEEEEEEEcHHHHHHHTcTTTccccccccccEEEEEEEEEccccccccTTcEEEEccEEEcccccHHHHTTcGGGcTTcEETTTcccTcccTTcccccccccccEEEEGGGEEEccccccHHHHTGGGTHHHHHHHHHHHTcTTcTTEEEEEcccHHHHHHHHHHHHHTcEEEEEEccTTHHHHHTTcccccEEETTcHHHHHHcTTTEEEEEEccccccccHHHHTTEEEEEEEEEcccccccccccHHHHHHHTcEEEEcccccHHHHHHHHHHHHHTTccccEEEEEGGGHHHHHHHHHTTccccEEEEETTcc###### DISOP:02AL 1-2,352-356| PSIPRED cccEEEEEEEcccccEEEEEEEcccccccEEEEEEEEEEEcccEEEEEEcccccccccEEccccccEEEEEEcccccccccccEEEEEcccccccccHHHccccccccccccccccccccccccccccccccEEEEEEEcHHHEEEccccccHHHHcccccHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHcccEEEEEcccHHHHHHHHHHcccEEEEcccHHHHHHHcccccEEEEccccHHHHHHHHHHHccccEEEEEccccccccccHHHHHHccEEEEEEEEccHHHHHHHHHHHHHcccccEEEEEEHHHHHHHHHHHHccccEEEEEEEHHHHcHHHcc //