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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87362.1
DDBJ      :             ABC transporter, membrane spanning protein (amino acid)
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  698/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:385 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   172->311 3dhwA PDBj 2e-11 30.3 %
:RPS:PDB   274->314 3dhwA PDBj 2e-09 40.5 %
:RPS:SCOP  171->382 2r6gG1  f.58.1.1 * 4e-29 11.8 %
:RPS:PFM   189->327 PF00528 * BPD_transp_1 2e-09 30.1 %
:HMM:PFM   191->369 PF00528 * BPD_transp_1 2.2e-26 22.0 168/185  
:HMM:PFM   113->173 PF11351 * DUF3154 2e-05 43.9 41/123  
:BLT:SWISS 1->385 AAPM_RHIL3 e-144 69.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87362.1 GT:GENE AAK87362.1 GT:PRODUCT ABC transporter, membrane spanning protein (amino acid) GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1564715..1565872 GB:FROM 1564715 GB:TO 1565872 GB:DIRECTION + GB:PRODUCT ABC transporter, membrane spanning protein (amino acid) GB:PROTEIN_ID AAK87362.1 GB:DB_XREF GI:15156666 LENGTH 385 SQ:AASEQ MTISNHAFVRQTIEDARPAPSSAVGFGHWLRTKLFATPKDTVLTVIALALLAYLVPPIIKWLFIDAVWTGSDRFACLTVSQGGALPDGQSGACWAFVSAKLGQFVFGRYPIDERWRPILVMVTFAILLVPMLIPKAPFKRLNALALFIILPFIAFFLLIGGVFGLPKVETQLWGGLMVTLILSFFGITVSLPFGILLALGRRSNLPVIKMLCVLFIEVIRGIPLITVLFFASIMLPLFLPDGWTFDKFLRALVGVSLFSSAYMAEVIRGGLQAIPKGQYEGADSLGLNYWQKTRLIVLPQALKLVIPGIVNTFIGLFKDTSLVSIIGMFDLLGIVTLNQADANWATPVTAMTGYIFAGFVFWIFCFGMSRYSLFMERHLDTGHKR GT:EXON 1|1-385:0| BL:SWS:NREP 1 BL:SWS:REP 1->385|AAPM_RHIL3|e-144|69.3|384/384| TM:NTM 9 TM:REGION 44->66| TM:REGION 116->138| TM:REGION 144->166| TM:REGION 176->198| TM:REGION 210->232| TM:REGION 249->271| TM:REGION 294->316| TM:REGION 318->338| TM:REGION 347->369| SEG 41->59|tvltvialallaylvppii| SEG 143->159|alalfiilpfiafflli| BL:PDB:NREP 1 BL:PDB:REP 172->311|3dhwA|2e-11|30.3|132/203| RP:PDB:NREP 1 RP:PDB:REP 274->314|3dhwA|2e-09|40.5|37/203| RP:PFM:NREP 1 RP:PFM:REP 189->327|PF00528|2e-09|30.1|136/195|BPD_transp_1| HM:PFM:NREP 2 HM:PFM:REP 191->369|PF00528|2.2e-26|22.0|168/185|BPD_transp_1| HM:PFM:REP 113->173|PF11351|2e-05|43.9|41/123|DUF3154| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF00528|IPR000515| GO:PFM GO:0006810|"GO:transport"|PF00528|IPR000515| GO:PFM GO:0016020|"GO:membrane"|PF00528|IPR000515| RP:SCP:NREP 1 RP:SCP:REP 171->382|2r6gG1|4e-29|11.8|212/284|f.58.1.1| OP:NHOMO 4566 OP:NHOMOORG 732 OP:PATTERN 11--12----------1-1111114--21-2211----1122--2222--1-1----2------2--- ----4313333321411----6--1D------766636C914225283533-769135--222-577B5A4755576631431------------------1--------11111111111111-----1--4---222331111-1234223332221121--1--3322-2222--2222-1341111--27455555875566556623398556333854355555396222222222222222222246757AB885676666B93757D533388886664AA888777888876666566666666767BA97778135575645455232344423333122142331AA-4132-1111111171--11137444422L56222412222374347567R-22G22D29DK23rTTPUXVVVhNONA---36K656845C1111111133511-49----------111111111111111--1-5--21-6IFCGLKKJMIA7BBBEEJRCBCC9BEFZ778412A8C94854B8FFLQ234----A44422222---25-11K-997C56BAAA42-23-3-------1--6-4441666663342222322-13----89B-3-----C-1111--11111111-11-2---1--------CCML6ECBAABBB9BBA-ABDBBBBBBBABBABBAACIOGNM777B8A8BBBBBBBBBB99GA99999A4-EBBBBBAABBBB--4-222221111--79F54552533323333266666-64554-FDDFGPJS9GHCE5MHJ----------777A99999AA97711---------------2----------------3--1----------------------132-115111--1 --------------------------------------------------------------------------------------------------------------------------------------------------------------1----2------6-----------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 162 STR:RPRED 42.1 SQ:SECSTR ###########################################################################################################################################################################HHHHHHHHHHHHHHHHHTTGGGGGGGGGGTTccccHHHHHHHHcHHHHHHccHHHHHHHTTcHHHHHHHTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTccHHHHHHHcTTccH#################################################### DISOP:02AL 1-5, 14-21, 381-385| PSIPRED cccccHHHHHHHHHccccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccccccEEEEEccccEEEEEEccccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //