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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87372.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  9/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.110.3
:231 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  117->220 1otdA_ d.110.3.1 * 0.00027 19.4 %
:HMM:PFM   119->227 PF08448 * PAS_4 1.7e-06 26.9 104/110  
:PROS 201->215|PS00165|DEHYDRATASE_SER_THR
:PROS 153->169|PS00237|G_PROTEIN_RECEP_F1_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87372.1 GT:GENE AAK87372.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1575229..1575924) GB:FROM 1575229 GB:TO 1575924 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID AAK87372.1 GB:DB_XREF GI:15156678 LENGTH 231 SQ:AASEQ MKDLIELFWLRYTELQSAVGKNESDKIAVLERELELLLERIVGRKTESSEDIREQFRFAIDLLNHEAEDLGCVQRNSELLRTLVDRYVGMPLKAKVVGDEDEDTLAWHHRHLILDEDMLNDLDEPVVIVSPGYRVSFANALDAFQRNAPEGLIGCHIAELVGVHRFQNILREKLDNCFKGDTSKYTYAEDENGRTVVKSLEMSPCYSSAYKLVGAMVVIREIADRRRRAAG GT:EXON 1|1-231:0| PROS 201->215|PS00165|DEHYDRATASE_SER_THR|PDOC00149| PROS 153->169|PS00237|G_PROTEIN_RECEP_F1_1|PDOC00210| SEG 30->40|lerelelller| SEG 223->230|adrrrraa| HM:PFM:NREP 1 HM:PFM:REP 119->227|PF08448|1.7e-06|26.9|104/110|PAS_4| HM:SCP:REP 117->220|1otdA_|0.00027|19.4|103/0|d.110.3.1|1/1|PYP-like sensor domain (PAS domain)| OP:NHOMO 9 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111-111111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 227-231| PSIPRED cHHHHHHHHHHHHHHHHHHccccccEEHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccHHHcccHHHHHHHHHHHHHHHccccHHccccccccccHHHHHHHHHHHHHHHHHccccEEEEccccEEEEEccHHHHHcccHHHHccccHHHHccHHHHHHHHHHHHHHHHcccEEEEEEEEcccccEEEEEEEEEEEEcccccEEEEEEEEEEHHHHHHcccc //