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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87407.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  17/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.129.3
:118 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   4->93 2b79B PDBj 4e-06 20.0 %
:RPS:SCOP  9->93 1z94A1  d.129.3.5 * 5e-07 29.3 %
:HMM:SCOP  9->118 1xn5A_ d.129.3.5 * 5.2e-08 29.0 %
:HMM:PFM   21->43 PF08327 * AHSA1 1.6e-05 42.1 19/123  
:HMM:PFM   48->99 PF08327 * AHSA1 0.00025 24.4 45/123  

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87407.1 GT:GENE AAK87407.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1614348..1614704) GB:FROM 1614348 GB:TO 1614704 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK87407.1 GB:DB_XREF GI:15156718 LENGTH 118 SQ:AASEQ MNRQIPKVPDAIELEYDLDEPPQKVWRAISIPAFREHWLPKEALAQPEAIKVSPGREVCYRLREDTPPFLESTVTFQIASNDRGGTSLRIIHDLPAIKSGRMTKAAANHNGSPIKLAA GT:EXON 1|1-118:0| RP:PDB:NREP 1 RP:PDB:REP 4->93|2b79B|4e-06|20.0|90/143| HM:PFM:NREP 2 HM:PFM:REP 21->43|PF08327|1.6e-05|42.1|19/123|AHSA1| HM:PFM:REP 48->99|PF08327|0.00025|24.4|45/123|AHSA1| RP:SCP:NREP 1 RP:SCP:REP 9->93|1z94A1|5e-07|29.3|82/140|d.129.3.5| HM:SCP:REP 9->118|1xn5A_|5.2e-08|29.0|100/0|d.129.3.5|1/1|Bet v1-like| OP:NHOMO 17 OP:NHOMOORG 17 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------------------1----------1--111-11-11111-------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 90 STR:RPRED 76.3 SQ:SECSTR ###cccTTEEEEEEEEEEcccHHHHHHHHHcGGGHHHHcTTEEEEEEcEEEETTcccEEEEEEEEETTTEEEEEEEEEEEcTTccEEEEEEEE######################### DISOP:02AL 1-5, 105-109| PSIPRED ccccccccccEEEEEEcccccHHHHHHHccHHHHHHHHcccccccccEEEEEccccEEEEEEccccccccccEEEEEEEEcccccEEEEEEcccHHHHHccccccccccccccEEEcc //