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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87482.2
DDBJ      :             glycosyl hydrolase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  611/915 : Eukaryota  69/199 : Viruses  0/175   --->[See Alignment]
c.1.8
:338 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->301 1y65A PDBj 3e-33 38.0 %
:RPS:PDB   1->291 3bmxA PDBj 2e-52 29.0 %
:RPS:SCOP  7->312 1tr9A  c.1.8.7 * 6e-57 30.5 %
:HMM:SCOP  3->331 1tr9A_ c.1.8.7 * 7.8e-68 35.6 %
:RPS:PFM   55->282 PF00933 * Glyco_hydro_3 2e-27 41.4 %
:HMM:PFM   63->282 PF00933 * Glyco_hydro_3 4e-30 25.1 207/227  
:BLT:SWISS 7->320 NAGZ_BORA1 5e-45 36.2 %
:PROS 241->258|PS00775|GLYCOSYL_HYDROL_F3

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87482.2 GT:GENE AAK87482.2 GT:PRODUCT glycosyl hydrolase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1693303..1694319) GB:FROM 1693303 GB:TO 1694319 GB:DIRECTION - GB:PRODUCT glycosyl hydrolase GB:PROTEIN_ID AAK87482.2 GB:DB_XREF GI:159140161 LENGTH 338 SQ:AASEQ MTDCKAMILGCSGLSLTADEIALYRDEQPWGFILFGRNIGEKQQITDLVAAMRDAVGRPDAPVLIDQEGGRVQRIKPPILQAYPNARILGEIYERDRSAGLRAAWLMSRLHAFDLTKFGINVDCLPVLDVPVEGASNVIGNRAYGYTPTMVAEMGQAAADGLKAGGMLPIMKHMPGHGRGMVDSHHELPVVDVPLDELDAHDFVPFRALKHELMAMSAHLVFNAVDRERPATTSKKVIDEIIRGRIGFDGLLMSDDSSMNALKGTLGERAANIVAGGCDIVLHCNGVMGEMLEVVKEVPVLSGRSLERVRAVEAGFPAADPSDEAELRAEFNAMWAVS GT:EXON 1|1-338:0| BL:SWS:NREP 1 BL:SWS:REP 7->320|NAGZ_BORA1|5e-45|36.2|307/350| PROS 241->258|PS00775|GLYCOSYL_HYDROL_F3|PDOC00621| BL:PDB:NREP 1 BL:PDB:REP 9->301|1y65A|3e-33|38.0|274/330| RP:PDB:NREP 1 RP:PDB:REP 1->291|3bmxA|2e-52|29.0|283/617| RP:PFM:NREP 1 RP:PFM:REP 55->282|PF00933|2e-27|41.4|210/226|Glyco_hydro_3| HM:PFM:NREP 1 HM:PFM:REP 63->282|PF00933|4e-30|25.1|207/227|Glyco_hydro_3| GO:PFM:NREP 2 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF00933|IPR001764| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF00933|IPR001764| RP:SCP:NREP 1 RP:SCP:REP 7->312|1tr9A|6e-57|30.5|295/330|c.1.8.7| HM:SCP:REP 3->331|1tr9A_|7.8e-68|35.6|315/0|c.1.8.7|1/1|(Trans)glycosidases| OP:NHOMO 834 OP:NHOMOORG 682 OP:PATTERN ---------------------------1---------------------------------1------ 12--31111111-111111-1111111111111111-11111-1-121-1--222--3--233122124211---------12-----2211-1111--11211212211--------------122222222222-11-------1111111-11111111111121111-111---1-11-111----2--1---------------111111---1-21321------121-----------------1----------------11-1----111-111-11---------2-----------------122---2221-111----------------21-211--2-1--11--1-----1-2-1--21-1111-----2123211111111111111-1111-11111111121-111123133211112121111111111--------1---1111------------1111111111111----1111111111112222111222111122222211111111111221111111111112111121111111111112121111111-11111----2---11111111-11111----------------1---111--12-1112111111111111111111111--11111------11111111111111111-1111111111111111111111211111111111111111111111111111-211111111111---11111122221111111111111112122111111111111-11111111111111111111122121111111111111111111111111111211-11111111222222222-1--------------------------2111121111-1 ---------------211123332323111111333232232211112221-11-1112111111----1--1-1-------1111---1-11-1--------111---------------------------------------------------------1----------1---11----11---1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 314 STR:RPRED 92.9 SQ:SECSTR EEccTTccccEEcccccHHHHHHHHHHcccEEEccGGGcccHHHHHHHHHHHHHHccccccEEEEccccTTccccccccHHccccHHHHHHHccHHccccccHHHHHHHHHHHHHHHHTccEEccccccccccTTccccGGGcccccHHHHHHHHHHHHHHHHHTTcEEEEEEETccTTccccTTTccccccccHHHHHHTTHHHHHHHHHTcEEEEcccccTTTcEEccGGGcHHHHccccccccccccEEEcccTTcHHHTccHHHHHHHHHHHTcccEEcccccccGGHHHHHccccGGGccHHHHHHHHH######################## DISOP:02AL 1-2| PSIPRED cccccEEEEEcccccccHHHHHHHHcccccEEEEEccccccHHHHHHHHHHHHHHHcccccEEEEEcccccEEEEccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccEEEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHccccEEEEEEEccccccccccccHHHHHHHHHHHccccEEEEEcccccccccccHHHHHHHHHHccccEEEcccccHHHHHHHHHcccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcc //