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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87487.1
DDBJ      :             exonuclease III
Swiss-Prot:             

Homologs  Archaea  28/68 : Bacteria  719/915 : Eukaryota  84/199 : Viruses  0/175   --->[See Alignment]
d.151.1
:265 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->261 2jc4A PDBj 7e-47 35.9 %
:RPS:PDB   1->255 1akoA PDBj 2e-40 35.3 %
:RPS:SCOP  1->255 1bixA  d.151.1.1 * 5e-71 32.4 %
:HMM:SCOP  1->261 1akoA_ d.151.1.1 * 2.5e-80 37.9 %
:RPS:PFM   1->255 PF03372 * Exo_endo_phos 8e-10 31.3 %
:HMM:PFM   1->256 PF03372 * Exo_endo_phos 6.6e-40 21.5 251/276  
:BLT:SWISS 1->259 EX3_HAEIN 2e-43 36.7 %
:PROS 174->189|PS00063|ALDOKETO_REDUCTASE_3
:PROS 27->36|PS00726|AP_NUCLEASE_F1_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87487.1 GT:GENE AAK87487.1 GT:PRODUCT exonuclease III GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1701558..1702355 GB:FROM 1701558 GB:TO 1702355 GB:DIRECTION + GB:PRODUCT exonuclease III GB:PROTEIN_ID AAK87487.1 GB:DB_XREF GI:15156812 LENGTH 265 SQ:AASEQ MKIATWNINGVKARIENLCQWLKDSSPDIVCLQEIKSVDEGFPRLEIEALGYHIETHGQKGFNGVALLSKVKPDEVNRGLPGDDADEQARFIEGVFSVEGGAIRVCSLYLPNGNPPDDPVKYPYKLAWMERLRRFAEDRLAMEEPLILAGDYNVIPEPFDCHDPRVWEGDALFLPKTRAAFRKLENLGFTDAARATTDAAGLYSFWDYQAGAWPKNNGIRIDHLMLSAEAADRLQSVEIEKHVRAWEKPSDHVPVCGYFDFSPIG GT:EXON 1|1-265:0| BL:SWS:NREP 1 BL:SWS:REP 1->259|EX3_HAEIN|2e-43|36.7|259/267| PROS 174->189|PS00063|ALDOKETO_REDUCTASE_3|PDOC00061| PROS 27->36|PS00726|AP_NUCLEASE_F1_1|PDOC00598| SEG 190->200|tdaarattdaa| BL:PDB:NREP 1 BL:PDB:REP 1->261|2jc4A|7e-47|35.9|256/256| RP:PDB:NREP 1 RP:PDB:REP 1->255|1akoA|2e-40|35.3|255/268| RP:PFM:NREP 1 RP:PFM:REP 1->255|PF03372|8e-10|31.3|233/261|Exo_endo_phos| HM:PFM:NREP 1 HM:PFM:REP 1->256|PF03372|6.6e-40|21.5|251/276|Exo_endo_phos| RP:SCP:NREP 1 RP:SCP:REP 1->255|1bixA|5e-71|32.4|244/275|d.151.1.1| HM:SCP:REP 1->261|1akoA_|2.5e-80|37.9|261/268|d.151.1.1|1/1|DNase I-like| OP:NHOMO 1205 OP:NHOMOORG 831 OP:PATTERN ------1111111111-1-----1--------1-1---111112---1-1111--------111---- -111222222212121111-12--121111112222223311111222221222222233111112222221111111111-----1111111111---212112223-2---------------11-111-1-11----------11-1111111111111111111111111111111111221----11-1111111-1-1-111-1----1111---11--11111111--------------------111111112-2112211111111111-------------------------------------------1-1111111111111111---11111111--1--1111-1-1----1-11-1-1222432222243332223333322222222222-22222222332123324333333432222222323322222222222222222221121111111342222222222222111112232222222222222222222233222222223322322222223222232322222222222222222222222211111111111111-----1-111111211111111111111111111111--11122111111111111111111111111111111--21112------11111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111222221212111111111111111111111111122333322322333332221111111111111111111111113233333222222211111111111111111111-------------------------------------11 -1--111------1---------------------------------------------------------------------------1-1--11--------1--1--2141111121111111121353-11111111113211-1-1--11-112112121-1211-21111-1--21-213221-11--2121- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 262 STR:RPRED 98.9 SQ:SECSTR cEEEEEEcccGGGcHHHHHHHHHHHcccEEEEEcccccGGGccHHHHHHTTcEEEEEEETTEEEEEEEEcccccEEEEccTTccHHHHTTEEEEEEEETTEEEEEEEEEccccccTTcTTHHHHHHHHHHHHHHHHHHHccTTccEEEEEEccccccGGGccccHHHHTcTTccHHHHHHHHHHHTTEEEHHHHHcTTcccccccccTTTTHHHHTcccccEEEEEEHHHHTTEEEEEEcHHHHTcccccccccEEEEEccc### PSIPRED cEEEEEEccHHHHHHHHHHHHHHHccccEEEEEEEEcccccccHHHHcccccEEEEcccccccEEEEEEcccHHHEEEccccccccccccEEEEEEEEccccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHcccHHHHcccccccHHHHHHHHHHHHcccEEEHHHHcccccccEEccccccccccccccEEEEEEEcHHHHHHEEEEEEEccccccccccccccEEEEEEEcccc //