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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87537.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  48/68 : Bacteria  642/915 : Eukaryota  31/199 : Viruses  0/175   --->[See Alignment]
c.104.1c.72.1
:491 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   32->487 2ax3A PDBj 4e-42 37.0 %
:RPS:PDB   25->489 2ax3A PDBj 3e-72 29.4 %
:RPS:SCOP  26->214 2ax3A2  c.104.1.1 * 2e-40 34.8 %
:RPS:SCOP  222->490 1kyhA  c.72.1.4 * 3e-28 23.5 %
:HMM:SCOP  7->245 1jztA_ c.104.1.1 * 2.2e-61 43.7 %
:HMM:SCOP  218->490 1kyhA_ c.72.1.4 * 5.7e-51 37.3 %
:RPS:PFM   26->187 PF03853 * YjeF_N 3e-16 42.6 %
:RPS:PFM   246->483 PF01256 * Carb_kinase 2e-31 44.6 %
:HMM:PFM   248->479 PF01256 * Carb_kinase 3.5e-47 35.3 224/242  
:HMM:PFM   26->187 PF03853 * YjeF_N 1.6e-40 44.4 162/173  
:BLT:SWISS 26->489 Y1433_SYNY3 8e-39 31.6 %
:PROS 436->446|PS01050|YJEF_C_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87537.2 GT:GENE AAK87537.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1752000..1753475) GB:FROM 1752000 GB:TO 1753475 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK87537.2 GB:DB_XREF GI:159140187 LENGTH 491 SQ:AASEQ MIFLSQLSLFDPAAMARIDAAAGQSGISLYDLMERAGHAVAASGLRHYPQALRFVVLCGGGNNGGDGYVAARALVQSGATVTVHHLGDAGTLRGDARVAFERSGLVPLPLGDYTPLAGDVVIDAVFGAGLSRDVPQELARIIEAVTSARVPVLAVDLPSGLCGRRGVPLGASFRAERTVTFMARKPGHLLMPGRELCGALEVFDIGIPLRILADHAGSVAENHPLVWRDALPASDLETHKFRRGHLTVFSGPAHATGASRMTALAALKAGAGIVTIAAPKEALDLLSVTLTAVMNAPMDNADDLRLWLDDQRHGTFVLGPGFGDLKKARQFVSLLGDKAAVLDADAITAFKDHAAALFERITSGAGKFVLTPHEGEFARLFPDLAADRTLSKIEKAQVASARSGAALVYKGADTVIAAPDGRALVSTNAPASLATAGSGDVLAGIIGALLAQGTPAFEAAAAGVWLHGEAGHRAGDGMTAEDLAHAVRPFG GT:EXON 1|1-491:0| BL:SWS:NREP 1 BL:SWS:REP 26->489|Y1433_SYNY3|8e-39|31.6|453/524| PROS 436->446|PS01050|YJEF_C_2|PDOC00806| SEG 13->22|aamaridaaa| SEG 59->67|gggnnggdg| BL:PDB:NREP 1 BL:PDB:REP 32->487|2ax3A|4e-42|37.0|432/484| RP:PDB:NREP 1 RP:PDB:REP 25->489|2ax3A|3e-72|29.4|449/484| RP:PFM:NREP 2 RP:PFM:REP 26->187|PF03853|3e-16|42.6|162/173|YjeF_N| RP:PFM:REP 246->483|PF01256|2e-31|44.6|233/244|Carb_kinase| HM:PFM:NREP 2 HM:PFM:REP 248->479|PF01256|3.5e-47|35.3|224/242|Carb_kinase| HM:PFM:REP 26->187|PF03853|1.6e-40|44.4|162/173|YjeF_N| RP:SCP:NREP 2 RP:SCP:REP 26->214|2ax3A2|2e-40|34.8|187/211|c.104.1.1| RP:SCP:REP 222->490|1kyhA|3e-28|23.5|255/268|c.72.1.4| HM:SCP:REP 7->245|1jztA_|2.2e-61|43.7|222/243|c.104.1.1|1/1|YjeF N-terminal domain-like| HM:SCP:REP 218->490|1kyhA_|5.7e-51|37.3|263/0|c.72.1.4|1/1|Ribokinase-like| OP:NHOMO 757 OP:NHOMOORG 721 OP:PATTERN 1111111111111111111111111--111--11111----1-1-1--11111111-----1111--- 11111111---1--11111-111111111111111111111------1----111111-----1-1111111111---11--1111111111-111---11111111111--------------111111111111111111111111111111111--11--111111111111111-1111111111121-1---------------1-11-1---111-111111111---11111-1-111111-11--1111--11111--11-1-111211--111----111-------1-1--------------111111111-1--111111111111111111111111111111111111111111111-11111111-----111111111111111111111111-22122122111-11111111111111111111---1-11111111111111111111111111----------------------12111122221--111-------11-----11-11111--1111111-1111111111111111121111111111111111111111111111111111-1--111111111-------1---1----1111--1-1111111-11111111111111111111---11-1------11111111111111111-111111111111111111111111--111-1111111111111111-1111--111111111111---111111122211112-----1---------11111-111--111111-111111111111111111111---11111111-1111222221111111--11--11----------1---------------------------1111111111111 ----111-211-----------1----11------------------------------------------------------------121---1-------1---1--2--1--1-----------------------31----------1-----11131----------1-----5-----1------1-1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 464 STR:RPRED 94.5 SQ:SECSTR ########################TTcccHHHHHHHHHHHHHHHHHHcccTcEEEEEEcccHHHHHHHHHHHHHTTTccEEEEEEccccccccHHHHHHHHHTccEEccccGGGGGGccEEEEEcccTTccccccHHHHHHHHHHHHcccEEEEEcccTTccTTTcccccccccccEEEEEccccHHHHcTTHHHHHcEEEEEcccccHHHHTTccEEEccHHH##HHHHcccccccccGGGGcEEEEEccccccccHHHHHHHHHHHTTccEEEEEEETTTTHHHHHHcTTcEEEEEccccccHHHHHHHTccEEEEcTTccccHHHHHHHHHHHHHccEEcHHHHHTccHHHHHTcccHHHHcccEEEcccHHHHHHHTccHHHHTccTcHHHHHHHHHHHTcEEEEccccEEEEccccEEEEccccGcGcccTTHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHHHTcGGGccHHHHHHHHHHE# DISOP:02AL 1-4| PSIPRED cccHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHccccccccccccccccEEEEccccccccccccHHHHHHHHHHHHccccEEEEEccccccccccccccccccccEEEEEccHHHHHcccccccccccEEEEEccccHHHHHHcccHHHHccHHHHHHcccccccccccccccEEEEEEcccccccHHHHHHHHHHHHcccEEEEEEcHHHHHHHHHcccHHEEcccccHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHcccEEEEcHHHHHHHccHHHHHHHHccccccEEEcccHHHHHHHcccccccccccHHHHHHHHHHHHccEEEEEccccEEEccccEEEEEccccHHHcccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHccccc //