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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87559.2
DDBJ      :             lipoprotein
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  213/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.57.1
:357 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   40->313 2hqbA PDBj 7e-13 24.7 %
:RPS:SCOP  62->109 1wu2A3  c.57.1.2 * 3e-04 14.6 %
:RPS:PFM   35->307 PF02608 * Bmp 2e-32 39.4 %
:HMM:PFM   28->311 PF02608 * Bmp 2.8e-53 28.3 283/306  
:BLT:SWISS 29->339 GRLJ_DICDI 7e-15 26.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87559.2 GT:GENE AAK87559.2 GT:PRODUCT lipoprotein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1775296..1776369) GB:FROM 1775296 GB:TO 1776369 GB:DIRECTION - GB:PRODUCT lipoprotein GB:PROTEIN_ID AAK87559.2 GB:DB_XREF GI:159140197 LENGTH 357 SQ:AASEQ MKKLVIALAASVAALGGVVSSAEAADAKKVCFIYVGSRTDGGWTQAHEIGREELQKHFGDKIETPFLESVPEGPDAERAIERMARSGCELVFTTSFGFMDATVKVAQKFPKVKFEHATGFKTAENVATYNSRFYEGRYIQGQIAAKMSKKGLAGYIASFPIPEVVMGIDAFVLGAQSVNPDFKLKVVWANTWFDPGKEADAAKALIDQGVDILTQHTDTTAPMQVAAERGIKAFGQASDMIAAGPQTQLTAIKDTWGAYYIKRTQALLDGTWKSESVWDGLKDGILTMAPYTNMPDDVKKMAEETEAKIKSGELHPFTGPVKKQDGSEWLKAGEKAEDKVLLGLNFYVAGVDDKLPQ GT:EXON 1|1-357:0| BL:SWS:NREP 1 BL:SWS:REP 29->339|GRLJ_DICDI|7e-15|26.4|292/783| SEG 7->25|alaasvaalggvvssaeaa| BL:PDB:NREP 1 BL:PDB:REP 40->313|2hqbA|7e-13|24.7|263/278| RP:PFM:NREP 1 RP:PFM:REP 35->307|PF02608|2e-32|39.4|269/288|Bmp| HM:PFM:NREP 1 HM:PFM:REP 28->311|PF02608|2.8e-53|28.3|283/306|Bmp| GO:PFM:NREP 1 GO:PFM GO:0008289|"GO:lipid binding"|PF02608|IPR003760| RP:SCP:NREP 1 RP:SCP:REP 62->109|1wu2A3|3e-04|14.6|48/136|c.57.1.2| OP:NHOMO 377 OP:NHOMOORG 230 OP:PATTERN 111-11------------1111112---------------------------------------1--- --1-----------------------------------1-----------------------3-1-1-1-------------1-------------------------------------------1-------1-211-----11-1-----12------------1121-------------1-1111-13111111-111111-11-1--311112112221------331------------------------------------------1----------------------------------------------1-11-1111111-1-11--111-1-1---111----2--1-1111111-11-------------222---1-11-11111112113-32221-4-24--4225544556561----3333333223---------11---12-----------------------------------1---1-------------52--------31211--111522-2321253-2-----2------------1-1-2-1132-13111--------1-1111-2-1---------------------------1-2---------------1------1-------------------------------------------------------------------------------------------------------------------3-2---------------------1----11111-11-----12323------------------------------------------------2---1-------------------------------12211-1------ ----22-------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 274 STR:RPRED 76.8 SQ:SECSTR #######################################ccccTHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHTTccEEEEccTHHHHHHHTTTTccTTcEEEEEccccccccEEEEEEccHHHHHHHHHHHHHHccccEEEEEEccTcHHHHHHHHHHHHHHHHTccEEEEEEcEccccccHHHHHHHHHHHHTTTccEEEcccTHHHHHHHHHHHTcEEEEEEccccccccccEEEEEEEcHHHHHHHHHHHTTTTccccEEEEEcGGGTcEEEccccTccHHHHHHHHHHHHHHHccc############################################ DISOP:02AL 1-1,21-23,357-358| PSIPRED cHHHHHHHHHHHHHHHHcccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHccccEEEEEcccccccEEEEEEEEcHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHcccEEEEEccccHHHccccEEEEEEEcHHHHHHHHHHHHHcccccccEEEEEcccccEEEcccccccHHHHHHHHHHHHHHHccccEEcccccccccccEEccccccccHHHHHHccHHHccccccccc //