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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87585.1
DDBJ      :             ABC transporter, nucleotide binding/ATPase protein
Swiss-Prot:             

Homologs  Archaea  68/68 : Bacteria  908/915 : Eukaryota  197/199 : Viruses  0/175   --->[See Alignment]
c.37.1d.41.3
:239 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   6->224 1l2tB PDBj 1e-59 53.0 %
:RPS:PDB   5->224 3b5jA PDBj 3e-48 27.8 %
:RPS:SCOP  6->210 1sgwA  c.37.1.12 * 2e-42 19.7 %
:RPS:SCOP  184->232 1uouA3  d.41.3.1 * 2e-05 14.3 %
:HMM:SCOP  9->224 1ii8.1 c.37.1.12 * 1.9e-62 40.0 %
:RPS:PFM   50->174 PF00005 * ABC_tran 1e-15 40.7 %
:HMM:PFM   50->174 PF00005 * ABC_tran 5.9e-23 36.8 114/118  
:HMM:PFM   144->218 PF02463 * SMC_N 0.00012 27.4 73/220  
:HMM:PFM   24->68 PF03215 * Rad17 2.2e-05 28.9 45/498  
:BLT:SWISS 5->227 MACB_AZOSE 2e-60 50.9 %
:PROS 147->161|PS00211|ABC_TRANSPORTER_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87585.1 GT:GENE AAK87585.1 GT:PRODUCT ABC transporter, nucleotide binding/ATPase protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1796346..1797065 GB:FROM 1796346 GB:TO 1797065 GB:DIRECTION + GB:PRODUCT ABC transporter, nucleotide binding/ATPase protein GB:PROTEIN_ID AAK87585.1 GB:DB_XREF GI:15156927 LENGTH 239 SQ:AASEQ MQQPPLIEFRNVVKQYGRGEATIRALDGVSLSIREKEFVAIMGPSGSGKSTSMNIIGCLDVPTAGEYLFQGVPTSGFDNEHLTLLRRHMLGFVFQGFNLLSRTSAVENVELPLVYRGMKASERRARAMEALAQVGLKGREDHTTQELSGGQQQRVAIARAIVTRPALLLADEPTGNLDTKTSNEIMELITALNRDRGITVVMVTHEEDIAAHAGRLLRFVDGHLASDSAADEKETSDVL GT:EXON 1|1-239:0| BL:SWS:NREP 1 BL:SWS:REP 5->227|MACB_AZOSE|2e-60|50.9|222/641| PROS 147->161|PS00211|ABC_TRANSPORTER_1|PDOC00185| BL:PDB:NREP 1 BL:PDB:REP 6->224|1l2tB|1e-59|53.0|219/232| RP:PDB:NREP 1 RP:PDB:REP 5->224|3b5jA|3e-48|27.8|216/243| RP:PFM:NREP 1 RP:PFM:REP 50->174|PF00005|1e-15|40.7|118/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 50->174|PF00005|5.9e-23|36.8|114/118|ABC_tran| HM:PFM:REP 144->218|PF02463|0.00012|27.4|73/220|SMC_N| HM:PFM:REP 24->68|PF03215|2.2e-05|28.9|45/498|Rad17| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 6->210|1sgwA|2e-42|19.7|188/200|c.37.1.12| RP:SCP:REP 184->232|1uouA3|2e-05|14.3|49/99|d.41.3.1| HM:SCP:REP 9->224|1ii8.1|1.9e-62|40.0|210/370|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 49522 OP:NHOMOORG 1173 OP:PATTERN VVLAQOHIVTTQUQXKnLRPNROYzNRkpTjWHCDCDBHGHEBUZRWkNR**j9SfQYYMRHIBY189 VboO*cchmmoVZRXVYQP-PeBBa*QQQQQQvqqsx***W*Y*z*yixtiU***PTnDDy**l*r****ecYYY*bcaR*fpBBD9CQQRK5NGKI--CHPKHLdMXOQ8BAAAAACDDCCCCHUQLTaQPYWaTnvv**KKK*YwjjvgemafQTLINJQJgccj***ZIOGNGGEPGMICjchSQpjAXdv************************gpw**lnvuuqst**VghhiheeffgggfeYdaWd*daa**aOaUfsrPQ**eVPYlkiijtrvqqpvurpsxssppsxptvZaaZZabcbcbZZ*olfcemknkr***********e*jn***Wiid*qito*emTN**ulaagjUbibnlPabdLcYVVLLLLJLeX***bXr****************-qv*ok*q***TC**************KMM**********TSTTTTTT*dgJTjY*66566666665667BB77985966A7575IFEEEF***************y********n********DP**x*qwot******croOZLRsZKLLLMJKTSSbtlc**RebznaqzecrKdbaWVdjVcbaadt*X*KNLPHMMNNKHDCDEEDEDDDWFFJPOpowTzVfMVPyUZcdZNWfYVVWZZaZZdf5-DMbSN221222*z**b*y**********-************************nlkpsmnpqqqopnnqnnm*wquyyw*V4************34LJEGEEFPQSQQN*r*edcbcYLRTQOWPThOQSRQGTIQUrd*yxw****x****k***EEDBCEDCEMksr*rssss*****UWRPPQPPQRECCC64MSPPKLIK99888889*CbDACE9-CCCCEFEMLJADNCLD667cgtUUq*prlDdO 1133VWM-YK96MXPGFDBBGIFKFMFCB6989KJHCGDECBD756GDFJFGNGFFM8BEBF74655834639844524656665645-HM7FAAG8888C5FKFD6NieVNXMcVOJGC8DMFjf5pB**e4iNpGGE6ZAGVO8IDBAVA8*DPQIrFb*GmMVCvYW*SZUEDHGJ*EECHNneh*CriFJmagoS ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 226-239| PSIPRED cccccEEEEEEEEEEEccccEEEEEEcccEEEEcccEEEEEEccccccHHHHHHHHHccccccccEEEEccEEcccccHHHHHHHHHHHccEEEEEEcccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHcccccccccHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHcccEEEEEEccHHHHHHcccEEEEEccEEEEccccccccccccc //