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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87598.1
DDBJ      :             putative transmembrane protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  85/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:1127 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   45->178 PF05170 * AsmA 5.4e-06 20.5 127/604  
:BLT:SWISS 142->326 HTRA_LACHE 8e-04 23.8 %
:BLT:SWISS 765->942 HMU_HALWD 8e-04 26.0 %
:TM

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87598.1 GT:GENE AAK87598.1 GT:PRODUCT putative transmembrane protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1809644..1813027) GB:FROM 1809644 GB:TO 1813027 GB:DIRECTION - GB:PRODUCT putative transmembrane protein GB:PROTEIN_ID AAK87598.1 GB:DB_XREF GI:15156942 LENGTH 1127 SQ:AASEQ MAEIRGEKVSFGKRDMVALHELPSAQAEDPIIVHCPPPRSMARAFCKIFAALFVLAFLSIGGIIVSVETGSIDKTLSSQAQQALEKALGPHYSARIGSSAIRFSTGLRLALVAEDVDIVEKESGQHLSRARAIGMALDPLALLAGHVSVQSLEADGMELDTALLPKGNGFDLASIKLDAVPQQLQAAFGQLDKLAQAFLSSGTEEIDISSVSVHLPPSDQGKPRTIEVRELSLTPDQQGGYTLDGETLFNGEIASVSLRTSGAGGVIDGFDARIDGFDIGPFLEKFDPDGNLHEGLNVKTGVNIVARRAMVAQEPRLEVSVGLGNGTLMIGGEAQPFTTGTVHARYDFAKNSVVIDNSRLELGRTIIPVNGEISDTEEGFGLSLRVDNGVASSEASGEAPVSFNLKADGHFATATKQLDVPSLYVSGPLGDMAGSLKIRFGEGSPEISFGGQIPKMEATAVKQLWPFWMAHKPRDWVVSNLYGGTVTNGSIAIFIPQGRMCGPGCPLVLGESEMQIRFDIDETRLNTTGDIPPLRDVDAHFDLVGGKMAVDIKEGTTYFPSNRTLSLENSRFLISDVYEKPLLGNLDLNVSGAADAVAELATLKPINALKDTQFKPEDFTGDVKANAKLTVGMLSSQNPPPPVWTADLDLKNLALTKPFAGHKVTALDGFMSLNDHQLKLEGKGRVDDVPMDIVMTEPVRKNSNVAPTLSLKATLNETQVAKLAPELSTVLGGTTAIEIDGADPKSQDIKLDLTKASIILPGLGWSKGIGIPASAAFTIQVADGRTTVSDFSLDGDGFGAAGDITFSKNGLISADLSRVKLSPADNYAVSVAASKNGYIVNASGKSADLRPFISKLRSPSSGGDGASRSQPTLSVKAQFDKVYGFNDEVLANVNADVSVRDGKVRSIDVRGVTGNGQAVVAQTVNRGATGTVTLTSSDAGSLARFANIYSRIRGGLLNLALTTSNGSDWSGSLDLRNFAVVNEAKLQDIVATPTGEDGRSLNNAVRRNIDVSSEKFQRGFARVVYVNGSVAVENGVVRGEQIGATFQGLLKDQSGRMEMTGTFMPAYGLNRLFGELPFIGIFLGNGRDRGLLGITFKLSGQTDQPKLTINPLSLIAPGVFRQIFEFQ GT:EXON 1|1-1127:0| BL:SWS:NREP 2 BL:SWS:REP 142->326|HTRA_LACHE|8e-04|23.8|181/413| BL:SWS:REP 765->942|HMU_HALWD|8e-04|26.0|169/9159| TM:NTM 1 TM:REGION 45->67| HM:PFM:NREP 1 HM:PFM:REP 45->178|PF05170|5.4e-06|20.5|127/604|AsmA| OP:NHOMO 85 OP:NHOMOORG 85 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111111111111111111111111-11111111111-11-1111111111111111-111111111111111-11111111111----11---------------1111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6, 856-871| PSIPRED cccccccEEEccHHHHHHHHHcccccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEEEEEEEEccccEEEEEEEEEEEEEcccccccccccEEEEEEccHHHccccEEEEEEEEEcccEEHHHcccccccEEEccccccccHHHHHHHHHHHHHHccccccccEEEEEEEEEEEEcccccccEEEEEEEEEEEEEcccccEEccccEEccccEEEEEEEEccccccHHHHHHcccccccccHHHHccccHHHcccccEEEEcEEccccccccccccccccccccHHHHcccccccccccccEEEEEEEccccEEEEHHHcEEcccccccEEEEEcccccEEEEEEEccccccccccccccccccEEEEEEEcccccEEEEcHHHcccccEEEEEEEEEEccccccEEEEEEEEccccHHHHHHHccHHccHHHHHHHHHHHcccEEEEEEEEEEEcHHHcccccccccccccEEEEEEEEEEEEEEEccccccEEcccEEEEEEccEEEEEEEEEEEEcccccEEEEEEEEEEEccccccccEEEEEEEEEccHHHHHHHHccccHHHHHHcccccccEEEEEEEEEEEEEEEcccccccccEEEEEEEEEEEEEEcccccccEEccEEEEEEEccEEEEEEEEEEEcEEEEEEEEEccccccccEEEEEEEEEccHHHHHHHcccccccccEEEEEEEccccccEEEEEEEcccEEEEcccccccccccccEEEEEEEEEccccEEEEEEEEEEEEccEEEEEEEcccccEEEEEEEEEEcccccEEEEEEcccccEEEEEEccEEEHHHHHHHHccccccccccccccccEEEEEEEcEEEEEccEEEEEEEEEEEEccccEEEEEEEEEEccccEEEEEEccccccEEEEEEEccHHHHHHHHHHHccccccEEEEEEEccccccEEEEEEEEEEEEEcHHHHHHHHHccccccccHHHEEccccccccEEEEEEEEEEEEEcccEEEEEEEEEEccEEEEEEEEEEEEcccEEEEEEEEEEEEEEccHHHcccEEEEEEEccccccEEEEEEEEEEEcccccEEEEEHHHHcHHHHHHHHHcc //