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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87631.2
DDBJ      :             putative homoserine/homoserine lactone efflux protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  357/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:212 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   16->190 PF01810 * LysE 4e-17 37.2 %
:HMM:PFM   14->200 PF01810 * LysE 3.3e-35 28.6 185/192  
:BLT:SWISS 1->190 RHTB_SHIFL 5e-19 29.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87631.2 GT:GENE AAK87631.2 GT:PRODUCT putative homoserine/homoserine lactone efflux protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1844353..1844991) GB:FROM 1844353 GB:TO 1844991 GB:DIRECTION - GB:PRODUCT putative homoserine/homoserine lactone efflux protein GB:PROTEIN_ID AAK87631.2 GB:DB_XREF GI:159140230 LENGTH 212 SQ:AASEQ MPLENWLAFVAASAIMLAIPGPTILLVISYALGHGRKASTATVTGVALGDFTAMTASMLGLGALLATSAALFTGLKWIGAAYLIYLGIKLWRSPVGGEGADGQGVTGRERPLKIFLHAYIVTALNPKSIVFFVAFLPQFLVPTLPFWPQVLIFEATFLVLATVNAALYGLLASAARNTIRKPKVQRIVNRTGGGLLIGAGLIAFGWKRAVSA GT:EXON 1|1-212:0| BL:SWS:NREP 1 BL:SWS:REP 1->190|RHTB_SHIFL|5e-19|29.4|187/206| TM:NTM 6 TM:REGION 8->30| TM:REGION 41->63| TM:REGION 68->90| TM:REGION 117->139| TM:REGION 152->174| TM:REGION 185->206| SEG 53->71|amtasmlglgallatsaal| SEG 192->203|ggglligaglia| RP:PFM:NREP 1 RP:PFM:REP 16->190|PF01810|4e-17|37.2|172/190|LysE| HM:PFM:NREP 1 HM:PFM:REP 14->200|PF01810|3.3e-35|28.6|185/192|LysE| GO:PFM:NREP 2 GO:PFM GO:0006865|"GO:amino acid transport"|PF01810|IPR001123| GO:PFM GO:0016020|"GO:membrane"|PF01810|IPR001123| OP:NHOMO 882 OP:NHOMOORG 359 OP:PATTERN ------------------------------------------1------------------------- -1--2---------1------1---2------2---1432-1----------111-------1-1121-----------------------------------------1------------------1-------1-------1----------------------------------------1--------232332131212121-111-1222-321---------5--------------------1---------------------1------------------------------------------------------------------------1----------1-----------------411--------433---222211112122-113-1-1--4112B11899255656646311-1152----213111111111111-1-3-------------------------------11--233257AA888633336646444445B544374--65823333317163113--1-33----------111-12-4-3-124--1--1-111-21----1------------------------1-----123-11--2211222222222211113123-------------1243-132222222222-2222222222222222222232361-1111111111111111111121112--211111111111---------1111-1677111------------22343-2111--44346644344435325----------1446443444484311--------1111---------------------------------------------------------1- ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 93-113,210-213| PSIPRED ccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHcccccc //