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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87675.2
DDBJ      :             htrA family protein
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  873/915 : Eukaryota  92/199 : Viruses  0/175   --->[See Alignment]
b.36.1b.47.1
:468 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   41->463 2zleA PDBj 3e-66 39.7 %
:RPS:PDB   72->250 3ee1A PDBj 5e-40 13.8 %
:RPS:PDB   238->354 2cssA PDBj 2e-13 15.8 %
:RPS:PDB   368->462 3diwB PDBj 3e-07 21.0 %
:RPS:SCOP  89->248 2bhgA1  b.47.1.4 * 2e-41 23.2 %
:RPS:SCOP  233->353 1nf3C  b.36.1.1 * 4e-15 15.8 %
:RPS:SCOP  377->463 2i4sA1  b.36.1.5 * 2e-10 22.5 %
:HMM:SCOP  37->261 1l1jA_ b.47.1.1 * 8e-65 44.2 %
:HMM:SCOP  222->358 1whaA_ b.36.1.1 * 7.2e-22 41.3 %
:HMM:SCOP  378->468 1lcyA1 b.36.1.4 * 2.6e-19 32.2 %
:RPS:PFM   105->243 PF00089 * Trypsin 7e-05 36.7 %
:RPS:PFM   292->348 PF00595 * PDZ 6e-04 42.1 %
:HMM:PFM   92->250 PF00089 * Trypsin 1.2e-17 23.6 157/219  
:HMM:PFM   291->326 PF00595 * PDZ 6.6e-07 38.9 36/81  
:HMM:PFM   397->439 PF00595 * PDZ 1.9e-08 33.3 39/81  
:BLT:SWISS 67->463 DEGP_SALTY 2e-70 41.7 %
:REPEAT 2|267->324|377->435

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87675.2 GT:GENE AAK87675.2 GT:PRODUCT htrA family protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(1892100..1893506) GB:FROM 1892100 GB:TO 1893506 GB:DIRECTION - GB:PRODUCT htrA family protein GB:PROTEIN_ID AAK87675.2 GB:DB_XREF GI:159140253 LENGTH 468 SQ:AASEQ MRGVLKYLSTGFLAALVLLPVGARAQDNKTVPASHTEMQLSFAPLVKRTAGAVVNVYAERVVQRRVSPFAGDPFFEQFFGQQMPNRTEKQSSLGSGVIVTAGGLVVTNNHVIDGADDIKVALADGREFSSKVLMKDDRVDLAVLQIDAKEQFPVLSLGDSDKIEVGDLVLAIGNPFGVGQTVTSGIVSGLARNQVTQGDFGFFIQTDASINPGNSGGALMNMAGELVGINTAIFSKGGGSNGIGFAIPANLVRVFVAAAERGDANFQRPYIGATFDPVTSDVAEALGLHRARGALVVGVTKGGPAEKAGIEPGQVVTAVNGLEVEHPDALGYRLTTAGIGKSAELTVVEKGKEKKLTIALNTAPETAPRDERLLEGRNPFAGATVANLSPKLADELRMPSQVTGVVITDVKRGSPAYRVGFQPKDVILSLNGADIGSTAAVEKALDDNPGFWRVEILRDGQRIRQFLR GT:EXON 1|1-468:0| BL:SWS:NREP 1 BL:SWS:REP 67->463|DEGP_SALTY|2e-70|41.7|381/475| NREPEAT 1 REPEAT 2|267->324|377->435| BL:PDB:NREP 1 BL:PDB:REP 41->463|2zleA|3e-66|39.7|388/396| RP:PDB:NREP 3 RP:PDB:REP 72->250|3ee1A|5e-40|13.8|159/336| RP:PDB:REP 238->354|2cssA|2e-13|15.8|114/121| RP:PDB:REP 368->462|3diwB|3e-07|21.0|95/106| RP:PFM:NREP 2 RP:PFM:REP 105->243|PF00089|7e-05|36.7|139/217|Trypsin| RP:PFM:REP 292->348|PF00595|6e-04|42.1|57/82|PDZ| HM:PFM:NREP 3 HM:PFM:REP 92->250|PF00089|1.2e-17|23.6|157/219|Trypsin| HM:PFM:REP 291->326|PF00595|6.6e-07|38.9|36/81|PDZ| HM:PFM:REP 397->439|PF00595|1.9e-08|33.3|39/81|PDZ| GO:PFM:NREP 3 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF00089|IPR001254| GO:PFM GO:0006508|"GO:proteolysis"|PF00089|IPR001254| GO:PFM GO:0005515|"GO:protein binding"|PF00595|IPR001478| RP:SCP:NREP 3 RP:SCP:REP 89->248|2bhgA1|2e-41|23.2|151/194|b.47.1.4| RP:SCP:REP 233->353|1nf3C|4e-15|15.8|120/123|b.36.1.1| RP:SCP:REP 377->463|2i4sA1|2e-10|22.5|82/102|b.36.1.5| HM:SCP:REP 37->261|1l1jA_|8e-65|44.2|224/228|b.47.1.1|1/1|Trypsin-like serine proteases| HM:SCP:REP 222->358|1whaA_|7.2e-22|41.3|104/0|b.36.1.1|1/2|PDZ domain-like| HM:SCP:REP 378->468|1lcyA1|2.6e-19|32.2|90/100|b.36.1.4|2/2|PDZ domain-like| OP:NHOMO 2608 OP:NHOMOORG 994 OP:PATTERN --1----1111111111111111-111112-1--1-----------1-----------------1-13 2472511211111133333-33333333333334442353244433113221434211113422325344211111111111412222112112111--1111223212211111111111111121111112131333554444493483342233333433233554763322223322237532222-423222222222222222223333223123432211111146222222222222222222221111111111111111111122211111111111111111111111111111111111111111111111211311111111111423322223231141221222322223322221-222B3337333336499A8436465433333333333-6756655437316333776766344333331244432233333333323334A331111111111111111111111111111122122122222444544334445545444444554444322544543423453422352423221111111223363331121232532221232342242654686351111111111111111111121121332222244232222222222222222222221-2323411-11133332333333333333-3333333333333333333333332223333333333333333333332333133333333333311322222222225342222222222221222223222222223422222222222222233---------12222222222222222222222222222--5133333311121222331-------------111---------1111111111454 1---112-1---111---------------------------------------------------------------------------------------------C-25544c24313454752739J4-3391322554331422242164544311111--11121--215765*554779779-AA3521117 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 434 STR:RPRED 92.7 SQ:SECSTR ###############################cccHHHHcccccccccccccccccccccccHHHHHHccccccccTTccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHTTcHHHHHHHHHTTcTTTTcccHHHHHHHHHHHHHHHHHHEEcTcHHccccccEEEEEEEEcccccEEEEEEEEccEEEcccEcccEEEEEEEEEEEEcccccccEEEcTTccHHHHHHHccEETGGGcEEEEEEEEcHHHHHHcEEEEcTTccccEEEEEEcHHHHHHHHHHHHTTccccEEEEEEcTTcHHHHHTccccEEEEEETTEEcccHHHHTHHHHTTcTTcEEEEEEEETTEEEEEEEEccccccccEcccTcccHHHHHcccccccEccHHHTcTTcTTTTccEEEcccccccTTGGGTccTTcEEccccccccccHHHHHHHHHTcccccEEEEEETTEEEcc### DISOP:02AL 1-3,25-39,63-68,83-91| PSIPRED ccHHHHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHcccEEEEEEEEEEcccccccccccHHHHHccccccccccEEEEEEEEEEEccccEEEEEHHHcccccEEEEEEccccEEEEEEEEEcccccEEEEEEcccccccEEEcccccccccccEEEEEEccccccccEEEEEEEccccccccccccEEEEEEEEEEcccccccEEEccccEEEEEEEEEEcccccccccEEEEccccccEEEEccccccccccccccccEEEcccHHHHHHccccccccEEEEEEEcccHHHHcccccccEEEEEccEEcccHHHHHHHHHHcccccEEEEEEEEccEEEEEEEEccccccccccccccccccccEEEEEEcccHHHHHHHccccccccEEEEEEcccccHHHHcccccccEEEEEccEEcccHHHHHHHHHHcccEEEEEEEEccEEEEEEEc //