[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87679.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:Y1919_AGRT5  RecName: Full=UPF0190 protein Atu1919;Flags: Precursor;

Homologs  Archaea  21/68 : Bacteria  330/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.176.1
:313 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   50->309 1xdyB PDBj 5e-94 63.1 %
:RPS:PDB   55->284 2biiA PDBj 2e-49 20.4 %
:RPS:SCOP  51->308 1xdqA  d.176.1.1 * 2e-74 62.8 %
:HMM:SCOP  58->309 1xdyA_ d.176.1.1 * 2.8e-87 46.8 %
:RPS:PFM   92->249 PF00174 * Oxidored_molyb 1e-20 40.0 %
:HMM:PFM   92->248 PF00174 * Oxidored_molyb 2.4e-42 37.4 147/169  
:HMM:PFM   21->40 PF10518 * TAT_signal 0.00016 50.0 20/26  
:BLT:SWISS 1->313 Y1919_AGRT5 e-175 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87679.2 GT:GENE AAK87679.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1897621..1898562 GB:FROM 1897621 GB:TO 1898562 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK87679.2 GB:DB_XREF GI:159140255 LENGTH 313 SQ:AASEQ MPAYRPPHIASSEITPKSFYLSRRNFLGTAAGLAAIGLAGREAIAAPLSAKPGAYKLDEKLTPLDAVTSYNNFYEFGVGKSDPKENSGKFKPTPWTVKVDGLVSKPQEFGIEELMKYPLEERTYRMRCVEGWSMVIPWIGFPLSALLDKVEPLGSAKYVSFETVVRPEEMPGQSGLFQPLSWPYVEGLRLDEARHPLTILAVGLYGETLPNQNGAPIRLVVPWKYGFKGIKSIMRISLVEKQPETTWKNSNAREYGFYSNVNPHVDHPRWSQATEQRIGEGGFFGTQNRPTLMFNGYDDVASLYTGLDLKANY GT:EXON 1|1-313:0| SW:ID Y1919_AGRT5 SW:DE RecName: Full=UPF0190 protein Atu1919;Flags: Precursor; SW:GN OrderedLocusNames=Atu1919; ORFNames=AGR_C_3511; SW:KW Complete proteome; Signal. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->313|Y1919_AGRT5|e-175|100.0|313/313| SEG 27->46|lgtaaglaaiglagreaiaa| BL:PDB:NREP 1 BL:PDB:REP 50->309|1xdyB|5e-94|63.1|255/262| RP:PDB:NREP 1 RP:PDB:REP 55->284|2biiA|2e-49|20.4|211/415| RP:PFM:NREP 1 RP:PFM:REP 92->249|PF00174|1e-20|40.0|145/156|Oxidored_molyb| HM:PFM:NREP 2 HM:PFM:REP 92->248|PF00174|2.4e-42|37.4|147/169|Oxidored_molyb| HM:PFM:REP 21->40|PF10518|0.00016|50.0|20/26|TAT_signal| GO:PFM:NREP 1 GO:PFM GO:0009055|"GO:electron carrier activity"|PF00174|IPR000572| RP:SCP:NREP 1 RP:SCP:REP 51->308|1xdqA|2e-74|62.8|253/262|d.176.1.1| HM:SCP:REP 58->309|1xdyA_|2.8e-87|46.8|252/0|d.176.1.1|1/1|Oxidoreductase molybdopterin-binding domain| OP:NHOMO 469 OP:NHOMOORG 351 OP:PATTERN 111---1-11111111--111-1-------11-----------------11-----------1----- 223-1----------22------------------------1-1-1---2------------1-------1-----------11---------------------1-1----------------------------11111---112123112-1--------1--12111------------211-----1----------------------------------------2--------------------------------------------------------------------------------------------------------------------------------------------1-11111-----122111--1111122222222222-12311522-2--11111212221114--11111111111--------33311111-----------------------------11121-111122222322222211322222222231112122221111121312-12-1-1112-----------13------------------1-1---332332--1----111111----------1-----11-1112-1-11211111111111111111----1-1------11212111112122111-11-111111111111111111111---11111111111111113-11---1--111111111111-------------1-1-11111--1-----111----------1-22221121111111222-------------1------------11111111------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 266 STR:RPRED 85.0 SQ:SECSTR ##############################################TTEEcccHEEEcccHHHHHHTcccccGGGccEEEccccccccGGGGGGcEEEEEEcccccEEEEHHHHHHcccEEEEEEEEcTcccEEEEEEEEEEHHHHHHHHcccTTccEEEEEEEEEEEEccccTEccccTTcccEEEEEHHHHTcTccEEEEEETTEEccGGGTTTcEEEcTTccGGGccccEEEEEEEccccccHHHHccccHHHcccccccTTccHHHHHHcGGGGccGGGcEEEEEcEEEEccTTcEEEEEEEcccccc# DISOP:02AL 1-8| PSIPRED ccccccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccEEEEEEEEcccEEEEHHHHHHcccEEEEEEEEEcccccEEEEEccccHHHHHHHccccccccEEEEEEccccccccccccccccccccccccEEHHHHccccEEEEEEEccEEccHHHcccEEEEEccccccccccEEEEEEEEEcccccHHHcccccccccccccccccccccccccccEEcccccccccccccccccccHHHHHHHHHcccccccc //