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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87791.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  50/68 : Bacteria  109/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:668 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   170->515 1e9rG PDBj 9e-14 10.8 %
:RPS:SCOP  164->364 1ni3A1  c.37.1.8 * 8e-07 14.8 %
:RPS:SCOP  409->515 1e9rA  c.37.1.11 * 2e-12 15.0 %
:HMM:SCOP  113->530 1e9rA_ c.37.1.11 * 5.7e-41 22.0 %
:RPS:PFM   156->301 PF01935 * DUF87 1e-10 30.8 %
:RPS:PFM   402->455 PF05707 * Zot 5e-05 38.5 %
:HMM:PFM   148->387 PF01935 * DUF87 4.1e-48 25.2 214/229  
:BLT:SWISS 135->516 Y3508_METJA 1e-24 28.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87791.2 GT:GENE AAK87791.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 1996183..1998189 GB:FROM 1996183 GB:TO 1998189 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK87791.2 GB:DB_XREF GI:159140296 LENGTH 668 SQ:AASEQ MNNDTSHNASRMDENERRSGEQPANRMLGRVIACNGAHATIAAETEPGSTDVSQLWSVGRLISIEMGTSRVTALVFSMRTGDDHWAADKPNRLLIDVELVGEVYRTEDGSERFSTGISRYPYLGAVAHRIRTSDLAKIYDSGKRDACVIGKLTQDDTINAAISIPQMLAKHFAVVGSTGVGKTTAVSLLLNKAIETDPKLRVLILDPHNEFAAAFPDHSVVIDTDTLDLPFWLMRLEEFAEVIFRGRKPVPEEMDFLRDLIPEAKKAFRGTEGSAVRRTSDKSAITPDTPVPYRIADLLALIDERIGRLEGRGEKPALRTLKGRILSAVNDTRYNFMFSSNTINDNILETVAHIFRIPGEGKPISVFQLSGIPSEVVNSVVSVLCRMSFELAVLARGSLHMLIVCEEAHRYVPADPERGFFPTRQSIAQIAKEGRKYGISLGVISQRPSELDQTILSQCSTVFAMRLSNEIDQKIILSAVPNASTSTTSFLSSIGNGEAIAFGEAVNVPMRMRFDRVATAKLPKASGTSSHMNHETPDTVDLNSIVTRMRATAKPVITGFQQSVEAAFSDQPEPSVFQTADDIDRWKRELGTPATGGYEPYRPDMLPGRTPPVPSNAASTDPTAGAVNDLRKAGFQMQAQNGPPPGETRPSLRESLLKKPLGSLYRKD GT:EXON 1|1-668:0| BL:SWS:NREP 1 BL:SWS:REP 135->516|Y3508_METJA|1e-24|28.2|355/520| RP:PDB:NREP 1 RP:PDB:REP 170->515|1e9rG|9e-14|10.8|332/417| RP:PFM:NREP 2 RP:PFM:REP 156->301|PF01935|1e-10|30.8|130/196|DUF87| RP:PFM:REP 402->455|PF05707|5e-05|38.5|52/190|Zot| HM:PFM:NREP 1 HM:PFM:REP 148->387|PF01935|4.1e-48|25.2|214/229|DUF87| RP:SCP:NREP 2 RP:SCP:REP 164->364|1ni3A1|8e-07|14.8|196/296|c.37.1.8| RP:SCP:REP 409->515|1e9rA|2e-12|15.0|107/420|c.37.1.11| HM:SCP:REP 113->530|1e9rA_|5.7e-41|22.0|373/433|c.37.1.11|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 193 OP:NHOMOORG 160 OP:PATTERN 11-2-3112222222222222222----1---11-13111111-1--111---111111121111--1 ---------------------------------------------1---------------------------------------111-----1-1-----1-----21-------------------111----11----111-11--2---1111--------1----------------------11-1------------1------------------------------------------------1----1-1---------------------------1-----------------------------------------------------------1-1-------------1----------------------21111211111----------1---1----1112-111211122111-1--------2-------------1----1-------------------------------1111--------------------1-------------------------1--1-1--------------1--1----1-1----1--------------------1---------------------1--------1------------1---1-----1--1--------------------------------------------------1----1---1------1---------------------------1--------------11-----------------1----------------1---1-1----1-1------------1--1--1----1-11-------------------------------1-------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 409 STR:RPRED 61.2 SQ:SECSTR ##########################################################################################################cccTTTccccccEEEEEccEEEEEEEccEEEccHHHHHHHHHHccccccccEETTEEccGGGGGcEEEEEcTTccHHHHHHHHHHHHHHTTcEEEEEEETTHHHHHHccTTcEEEcTTcTTcccccGGGGcccTTHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHTHTTcccHHHHHHHHHTccHHHHHHHHTTcTHHHHTcccHHHHHHHHHHHHHHHHHcHHHHHcccccccHHHHHHcTTcccEEEEEcGGGHHHHHHHHHHHHHHHHHHGGGccccTTccEEEEEHccTTccEEEEEccGGGccccccHHHHHHHcTTTTEEEEEEEccHHHHHHHHHTTccEEEEEEccTTcHHEEccEEEEEEEcccHHHHHTccTTEEEEEccccccEEEEEcc######################################################################################################################################################### DISOP:02AL 1-25,517-536,563-578,598-622,634-654,667-669| PSIPRED ccccccccccHHHHHHHHccccccccccEEEEEEEcccEEEEEEcccccccccccccccEEEEEEcccEEEEEEEEEEcccccccccccccEEEEEEEEEEEEEEccccccccccccccccccccEEEcccHHHHHHHHcccccccEEEEEEcccccEEEEEEHHHHccccEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEEcccHHHHHHHHcccEEcccccccccccccHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHccccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHcccccccEEEEEcHHccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEcHHHHccccccccHHHHHHHHHHHHHHHHHccEEEEEEEccHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHccccHHHHHHHccccccEEEEEEccccccEEEEEEcccccccccccccccccccccccHHHHHHHHHHHHccccccHHHHHHHHccccccccccccccccHHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHccc //