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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87795.1
DDBJ      :             short chain dehydrogenase
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  877/915 : Eukaryota  191/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:249 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   3->244 2uvdA PDBj 2e-34 37.9 %
:RPS:PDB   4->244 2ae1A PDBj 2e-42 26.2 %
:RPS:SCOP  9->244 1pwxA  c.2.1.2 * 4e-44 20.5 %
:HMM:SCOP  1->244 1zemA1 c.2.1.2 * 1.8e-78 45.9 %
:RPS:PFM   7->174 PF00106 * adh_short 7e-25 47.0 %
:HMM:PFM   7->175 PF00106 * adh_short 7.1e-35 30.7 163/167  
:BLT:SWISS 3->246 FABG_CHLMU 6e-37 39.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87795.1 GT:GENE AAK87795.1 GT:PRODUCT short chain dehydrogenase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2000568..2001317) GB:FROM 2000568 GB:TO 2001317 GB:DIRECTION - GB:PRODUCT short chain dehydrogenase GB:PROTEIN_ID AAK87795.1 GB:DB_XREF GI:15157168 LENGTH 249 SQ:AASEQ MKLLENKVAIITGASSGIGRATAMLFVTQGAAVVINARGEKALQEVAADIRDAGGRVHAVAGDAGVAETHSRLADAAVGVFGGLDIAINNAGAVGAMKPLAEISPEEWDHVLNVNLTSAFLGARYQIPPMLKRGGGSIVFTSSFVGTSAGIPGMSAYGTAKAALMGLVKGITADYAINGIRANALLPGGVDTPAAGDPAQKEWAAGLHAMKRIAQPEEIAQAALFLASPMASFVAGAALFADGGNAAVK GT:EXON 1|1-249:0| BL:SWS:NREP 1 BL:SWS:REP 3->246|FABG_CHLMU|6e-37|39.0|241/248| BL:PDB:NREP 1 BL:PDB:REP 3->244|2uvdA|2e-34|37.9|240/246| RP:PDB:NREP 1 RP:PDB:REP 4->244|2ae1A|2e-42|26.2|240/252| RP:PFM:NREP 1 RP:PFM:REP 7->174|PF00106|7e-25|47.0|166/169|adh_short| HM:PFM:NREP 1 HM:PFM:REP 7->175|PF00106|7.1e-35|30.7|163/167|adh_short| GO:PFM:NREP 2 GO:PFM GO:0008152|"GO:metabolic process"|PF00106|IPR002198| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00106|IPR002198| RP:SCP:NREP 1 RP:SCP:REP 9->244|1pwxA|4e-44|20.5|229/252|c.2.1.2| HM:SCP:REP 1->244|1zemA1|1.8e-78|45.9|242/0|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 19368 OP:NHOMOORG 1124 OP:PATTERN 2221246ACACABAA728454121C66B797B22---------21154--622-34223242954155 LMl6x3-577F795u**WW-W*55y*WVWWWn****w***7*F*XMHB4GD3ULPB5E11RNg7UOmlsZE111121222B8Y21444777727221--96X5GH*EgBN111111111111114796CG876C99JKKRQ222MFMHJJCA77644433754373HICaA222143243223NECCD771J9QFFGFGIGIFFHGHIHRIQQIRFFHBIIOMIF999987Lj944454334444443A99BCA2E19916132CF55778788AA887656666632233333343333465566676666624411144475358D55544445477466258563311A9222A6123325333356524G2LtOOe12222WJ*rs79DhaYaWMNNMLLNLNNa-PUdRMxNci*o2*ooS*oy*****fjLVIQUYSKQVNKQAAAAAAAATVTFADHD22222222122322332231222121112CM**QCLpeSo*y****bWWXStt**bZZaBY*i*f**q49UUQOFONNePhQ*r9JB6A6EE7446444447BNKA6S8G521212433528C98H75A6BEGDUe332434333223235222222253535A9DB9BHIHBPD88BAABAGDCABAE8DABAE1-3578A11-111FJJJ8PBFHHFFEEEGH-HHGIHDEFGFHEHGGFHGFSYULDBCCDABCCCDCDDCBCBCCYDEBEDCE51ABBBBBBABBBB111966564JIIH6KOOL111729122222463PQQUREKCGCQBYYVVQVdjQRTZUMSQT6333353333656G65665BA79APRNMQLKDDF97773244BB9899--------1-4----2---2-1------2-------44421656763F3 11--CEJ-4-3-6DHr*pirhnc*z*xOPFJHKUPQMWORKSSMKIdahss***bfWPKPJNFAQ9694C54JAK443459GGHMJ3D-V*S*MeLDFDEHAIOJG-KXA*VhUUWMA7A7IT9WT5VAj*T-QPYC6C8W9DSH7FB9AP46RDNIRitybGuZTJONUfJcXS8GE6*333ISPnp*lyMIHZJMLE ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 249 STR:RPRED 100.0 SQ:SECSTR GGGcTTcEEEEETcccHHHHHHHHHHHTTTcEEEEEEccHHHHHHHHHHHHHTTccEEEEEccTTcHHHHHHHHHHHHHHTTTcccEEEEcccccccccGGGccHHHHHHHHHHHTHHHHHHHHHHHHHHHTTccEEEEEEccGGGcTcccTTcHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEcccccccHHHHHHHHHHHHTccccccccHHHHHHHHHHHHcGGGTTccccEEEEcTTHHHHc PSIPRED cccccccEEEEEccccHHHHHHHHHHHHcccEEEEEEccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHHHHHccccEEEEccccccccccHHHccHHHHHHHHHHHcHHHHHHHHHHHHHHHHccccEEEEEccHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEccccccccccccHHHHHHHHHcccccccccHHHHHHHHHHHHcHHHccccccEEEEcccHHHcc //