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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87804.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  48/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:1234 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   23->187 PF05170 * AsmA 3e-11 27.8 %
:HMM:PFM   7->177 PF05170 * AsmA 1.2e-12 20.6 165/604  
:HMM:PFM   530->603 PF05170 * AsmA 6.6e-06 19.2 73/604  
:HMM:PFM   863->992 PF05170 * AsmA 0.00019 20.2 129/604  
:HMM:PFM   1117->1222 PF12230 * PRP21_like_P 0.0001 22.7 88/229  
:BLT:SWISS 108->263 EIF3E_SCLS1 2e-05 31.6 %
:BLT:SWISS 582->676 ECTB_STRAW 7e-04 32.6 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87804.1 GT:GENE AAK87804.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2009375..2013079) GB:FROM 2009375 GB:TO 2013079 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK87804.1 GB:DB_XREF GI:15157178 LENGTH 1234 SQ:AASEQ MLGRILVFLGGLLALVLFSALLIPYFVDWTDFRRDFEDQASRILGKKVVVHGRVEARLLPFPSVTLHDVRAGTDADGSPLIQVARFSMDAELAPFLSGEARIFDMRIEEPKAKIRLLKDGTLDWMRGSRAEIPARTVVLESVQIEGGQIEFIDEQSGRNRVVTGLNADMSANSLAGPWKAEGRAAVDGHPGSFSLSSSEPDYANGRMGLRLRLVPDEHPVEVDLDGAIAATAGKPAYSGSFSFSFREDEKQKQQAGQSLFSSPRTRGSFELTNESVRIPSYRMELGASENPYIVTGEATLDTGAKPEFLLTADGQQIDVARFAPPVVQTGKTSRQPTVSVRQRVEAFAAMVARIPVPPVPGKASISLPALVSDDTTIRDIRLDVRPDGSGWQVVNAVATLPGRTQLEAKGSLTLLGGPAFNGNLLLASNQPSGLANWLSGSVDPAIRQLNAAGFSADVSLTTLNQRFNNLELAIGDASLKGELERRSDGKTSNLSIDLAGNEIDLDALRALGSLALGDQVGSSVLDHRITAKFKADRFNMAGVTANHVETAFTMAGGVLSLENMTAGDIAGAEVKAKGQLQGSLLKYAGKGTVNLHAADMQPFFTMLQQKLPDHPFLSRLAASAPWYANSDLAMDVSVNSDNGGANVAVSGTVNGSRLSAVAKMPDFLSITDDTAMSLEAVLKNQSTAILFGQAGLDPLPFDADGEGLLSVKLNGTLGSPAQTELRFSTERTHFSMNGSFAVAAANFGEGSADVALESADIEPYLIMNAVGLPQLGGGMAVKANAKVAVDGQKIAFSSIGGQAGGNPFSGNVTVQRAAPHPVTGELSVRTADLAWLGDVIYGPVIDPETGALNAKPLAMPAFPQLKASLALKAESFEAGPFGTVTGVSAKLTHDAGSLSLDDVAGTFMGGKLAGRLAMSTGEGAGIFRSKIAVTDANPEPILWANANGPVATGRVAIDLTAESTGKSVGEMLKSAGGSGEVRASGLVLKGLNPGALPPILQAADGLQQPIDAPKVRPLVDQSLWQGEIALGDVALPFSLNGGALHFKNLRAGIDPVTLTADATVDIAASTVNGDLNLLFNPGTETVAGAEPSVRLNYNGPLAAPALTTDVSALSNYLSLRAFEKERRRVEAMQASVLEKQRLRREVALYRSQAAERQAEKERAEAEAKAKAEEEARLKAAAEERLRQEKEQQERLQQQQQQQPAPERKSAPALVVPPTEDAIRQLAPENAPATP GT:EXON 1|1-1234:0| BL:SWS:NREP 2 BL:SWS:REP 108->263|EIF3E_SCLS1|2e-05|31.6|152/451| BL:SWS:REP 582->676|ECTB_STRAW|7e-04|32.6|92/423| COIL:NAA 62 COIL:NSEG 1 COIL:REGION 1137->1198| TM:NTM 1 TM:REGION 5->27| SEG 6->22|lvflggllalvlfsall| SEG 1152->1208|qaaerqaekeraeaeakakaeeearlkaaaeerlrqekeqqerlqqqqqqqpaperk| RP:PFM:NREP 1 RP:PFM:REP 23->187|PF05170|3e-11|27.8|158/396|AsmA| HM:PFM:NREP 4 HM:PFM:REP 7->177|PF05170|1.2e-12|20.6|165/604|AsmA| HM:PFM:REP 530->603|PF05170|6.6e-06|19.2|73/604|AsmA| HM:PFM:REP 863->992|PF05170|0.00019|20.2|129/604|AsmA| HM:PFM:REP 1117->1222|PF12230|0.0001|22.7|88/229|PRP21_like_P| OP:NHOMO 50 OP:NHOMOORG 49 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11112-11111111111111111-111111-1111111111111111111----------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 122-138, 201-211, 328-341, 840-855, 918-927, 1144-1213, 1226-1234| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHEEEccHHHHHHHHHHHHHHHccEEEEEEccEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEEEEEHHHHcccEEEEEEEEEccEEEEEEcccccccccccccccccccccccccEEEEccEEEEEEcccccEEEEEEEEccccccccccEEEEEEEEEEcccEEEEEEEccccccccccEEEEEEEEcccccEEEEEEEEEEcccccEEEEEEEEEccccHHHHHHHHccccccccccEEEEEEcccEEEEEEcEEEEcccccccEEEEEEEEEcccccEEEEEEcccEEcHHHHcccccccccccccccccccccHHHHHHHHHccccccccccEEEEcHHHHccccEEEEEEEEEEEcccEEEEEEccccccccEEEEEEEEEcccccccccccEEEEccccHHHHHHcccccccccccccccccEEEEEEEccEEEEEEEEEEEcccEEEEEEEEEEccccccEEEEEEcccEEHHHHHHHHHHcccccccccccccccccccccccccccccccccccEEEEEcccEEEEEEEEEEccccccEEEEEEEEccccccEEEEEEEEcHHHHHHHHHHHHHcccccccHHHcccccccccccccccEEEEcccccEEEEEccccccccccEEEEccccccHHcccccEEEEEEEcccccHHHHHHcccccccccccccccEEEEEEEcccccccEEEEEEEccEEEEEEEEEEcccccccccccEEEEccccHHHHHHHHccccccccccccEEEEEEEEEcccEEEEEccEEEEccEEEEEEEEEEEcccccEEEEEEEcccccHHHcccccccccccccccccccccccccccccEEEEEEEEEEEEEcccEEEEEEEEEEEEEccEEEEEEEEEEEEEEEEEEEEEEcccccccEEEEEEEEEcccHHHHHHHHccccccEEEEEEEEEEEEccccHHHHHHHcccEEEEEEEccEEEcccHHHHHHHHHHHHHccccccHHHHHHHHHHHcccccEEEEEEEEEEEEEccEEEccccEEEEccEEEEEEEEEEEcccEEEEEEEEEEEEccccccccccccEEEEEEEHHcccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccccccccHHHHHHHHccccccccc //