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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87805.2
DDBJ      :             FAD dependent oxidoreductase
Swiss-Prot:             

Homologs  Archaea  43/68 : Bacteria  658/915 : Eukaryota  189/199 : Viruses  0/175   --->[See Alignment]
d.145.1d.58.32
:470 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   52->286 2uuuC PDBj 4e-18 26.7 %
:RPS:PDB   23->468 2bvfA PDBj 8e-79 14.6 %
:RPS:SCOP  29->227 1ahuA2  d.145.1.1 * 2e-34 24.6 %
:RPS:SCOP  228->468 1f0xA1  d.58.32.2 * 9e-49 10.2 %
:HMM:SCOP  16->227 1diqA2 d.145.1.1 * 2.1e-65 42.9 %
:HMM:SCOP  225->467 1e8gA1 d.58.32.1 * 7.1e-74 40.3 %
:RPS:PFM   54->185 PF01565 * FAD_binding_4 4e-21 40.5 %
:RPS:PFM   227->465 PF02913 * FAD-oxidase_C 1e-40 43.5 %
:HMM:PFM   226->466 PF02913 * FAD-oxidase_C 2.3e-68 36.5 241/249  
:HMM:PFM   53->189 PF01565 * FAD_binding_4 2.4e-42 40.7 135/138  
:BLT:SWISS 31->466 LDHD_MOUSE e-126 51.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87805.2 GT:GENE AAK87805.2 GT:PRODUCT FAD dependent oxidoreductase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2013171..2014583) GB:FROM 2013171 GB:TO 2014583 GB:DIRECTION - GB:PRODUCT FAD dependent oxidoreductase GB:PROTEIN_ID AAK87805.2 GB:DB_XREF GI:159140302 LENGTH 470 SQ:AASEQ MALKDVVAGKRNEEGIASALAVLKQQLGDKLQTGQAFREQHGHTTTYLTLQAPDGVVFAESADDVKAVVKACAQYKVPVIPFGTGSSLEGQVNAPNGGICIDFSRMNRIIEVNAEDLDVTVEPGVTREDLNVYLRDTGLFFPIDPGANASIGGMASTRASGTNAVRYGTMKDNVLAVTAVVANGEEIRTARRARKSSAGYDLTRLFVGAEGTLGVITSVTLRLQGIPEKITGGVCTFDSIKAACDAVIMTIQMGVPVARIELLDEVQVRACNAYSGLNYAEKPTLFVEFHGTEETAALQSQQFAEIAAECGSVDFRWTGDAAERNKLWKARHDAYWASRALAPHLDGLSTDVCVPISRLADCVVETQRDIAENGFLAPIVGHAGDGNFHVLILFDGKDAESVAKTEAFVARLNRRAIAMDGTCTGEHGIGQGKMSFLAEEAGNALDLMRAIKTSLDPDNIFNPGKLFRLV GT:EXON 1|1-470:0| BL:SWS:NREP 1 BL:SWS:REP 31->466|LDHD_MOUSE|e-126|51.4|436/484| SEG 62->71|addvkavvka| BL:PDB:NREP 1 BL:PDB:REP 52->286|2uuuC|4e-18|26.7|221/541| RP:PDB:NREP 1 RP:PDB:REP 23->468|2bvfA|8e-79|14.6|432/453| RP:PFM:NREP 2 RP:PFM:REP 54->185|PF01565|4e-21|40.5|131/139|FAD_binding_4| RP:PFM:REP 227->465|PF02913|1e-40|43.5|237/242|FAD-oxidase_C| HM:PFM:NREP 2 HM:PFM:REP 226->466|PF02913|2.3e-68|36.5|241/249|FAD-oxidase_C| HM:PFM:REP 53->189|PF01565|2.4e-42|40.7|135/138|FAD_binding_4| GO:PFM:NREP 4 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01565|IPR006094| GO:PFM GO:0050660|"GO:FAD binding"|PF01565|IPR006094| GO:PFM GO:0003824|"GO:catalytic activity"|PF02913|IPR004113| GO:PFM GO:0050660|"GO:FAD binding"|PF02913|IPR004113| RP:SCP:NREP 2 RP:SCP:REP 29->227|1ahuA2|2e-34|24.6|199/268|d.145.1.1| RP:SCP:REP 228->468|1f0xA1|9e-49|10.2|226/237|d.58.32.2| HM:SCP:REP 16->227|1diqA2|2.1e-65|42.9|212/0|d.145.1.1|1/1|FAD-binding domain| HM:SCP:REP 225->467|1e8gA1|7.1e-74|40.3|231/0|d.58.32.1|1/1|FAD-linked oxidases, C-terminal domain| OP:NHOMO 2628 OP:NHOMOORG 890 OP:PATTERN 22-1-143345444441133321331111122----------------13111----1--12113-11 12455--1111-2-33333-332256434443333338D7145331121111143312--44524684531--------1-141111111---1-------211121212---------------2211121111266654---232322332222222222222232222-1-----2----22233--131122222222222222253111122234413--------2------------------------1111----11--21------------------------------------------------------4-121111111212-122211131-1-1--2-461121--52--1--1-322311411111348663255674544444443446-45744B5956416444448545877532155444564442222222243322335-----------------------------11861164445977A7A3555588BA555544B798A881455476544A6966A436321124111111145345614724345453555-322112222545545232--112211211211111111111133211-41213122222212322222222232---6323------21111114213434444-244444444424444444112111111111111111111111121121111--111111111111---1--112-11132455111111-111111111111111352516666575445556434431112311111112111111112222222222232222112-221122--------1-1--------------------------11---2---421 ----332-741-2423465453455543344443333433333233444456684334344423324334225243313334446312-47443323332322432-32373345333111332842528K5-4351311321311323231-33352558434322425335342333Y3222131174313386652 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 462 STR:RPRED 98.3 SQ:SECSTR ######HHcGGGEEEHHHHHHHcccccccEEcTTcTTHHHHHccccTTccccccEEEEcccHHHHHHHHHHHHHHTccEEEEcccccTTcTTccccccEEEEcTTcccEEEEETTTTEEEEETTccHHHHHHHHHTTTEEEcccccTTccHHHHHTTccccTTHHHHccGGGGEEEEEEEcTTccEEEcGEEEEEccccHHHHHHHHHHGGGTcEEEEEEEEEEEccccEEEEEEEEcccHHHHHHHHHHHHHHHHccccHTTTTcccEEEEEEcTTcccEEEEEEEEccccHHHHHHHHHHHHTTccccEEccEEEcHHHHHHHHHHHcccccccEEEEEEEEEHHHTTGGGcEEETTTTEEEEEEEEccccccTTccccccccccEEEEEEEEcTTcTTTTHHHHHHHHHHTcEEEEEccGGGcccccHHHHHHHHHHcHHHHHHHHHHHHHHcTTcccccccccc## DISOP:02AL 1-1,3-3,5-5| PSIPRED ccccccccccccHHHHHHHHHHHHHHccccEEccHHHHHHHHcccccccccccEEEEEEccHHHHHHHHHHHHHcccEEEEEccccccccccccccccEEEEcHHcccEEEEEccccEEEEEccccHHHHHHHHHHcccEEEccccccccHHHHcccccccccccccccHHHHEEEEEEEcccccEEEEccccccccccccHHHHHcccccccEEEEEEEEEEEEccccEEEEEEEEccHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHccccccccccEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHHHHHHHccccccEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEEEEEccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHcHHHHHHHHHHHHHHccccccccccccccc //