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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87813.2
DDBJ      :             hydrolase
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  314/915 : Eukaryota  14/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:286 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   30->128 1y37A PDBj 4e-10 33.3 %
:RPS:PDB   28->270 3e3aB PDBj 6e-35 21.4 %
:RPS:SCOP  26->269 1a7uA  c.69.1.12 * 2e-30 25.4 %
:HMM:SCOP  4->279 1vj5A2 c.69.1.11 * 1.4e-52 29.7 %
:RPS:PFM   60->251 PF00561 * Abhydrolase_1 3e-17 36.7 %
:HMM:PFM   59->264 PF00561 * Abhydrolase_1 1.2e-27 25.2 206/231  
:BLT:SWISS 4->266 TPES_PSEPU 2e-29 29.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87813.2 GT:GENE AAK87813.2 GT:PRODUCT hydrolase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2024960..2025820 GB:FROM 2024960 GB:TO 2025820 GB:DIRECTION + GB:PRODUCT hydrolase GB:PROTEIN_ID AAK87813.2 GB:DB_XREF GI:159140307 LENGTH 286 SQ:AASEQ MTAPSLDNWEKRKRFVELPRKRQMAFIDTGGPGPVLLMLHGFSDTSRSFSIIEPYFQEYRLIAPDLPGHGASSVGHGFHVADFAETIDRFLTLMGVSRFFVLGHSMGAMTAIELAARRSSSVRGLALISGTLEPDFGTESKLARDILALRDPIKPAGGFLHDWYSCSRPVNEEFLFRMKRDAANMAATTWHGVLKAFAETDLHYSASKINVPVLCLAGSEDPLFDDSHRQQLFEAFPLAQTVTMPGHGHNPHWENPQGVSTLVTEFFAEVMTDASPVRVETAADKR GT:EXON 1|1-286:0| BL:SWS:NREP 1 BL:SWS:REP 4->266|TPES_PSEPU|2e-29|29.1|261/272| BL:PDB:NREP 1 BL:PDB:REP 30->128|1y37A|4e-10|33.3|99/294| RP:PDB:NREP 1 RP:PDB:REP 28->270|3e3aB|6e-35|21.4|243/275| RP:PFM:NREP 1 RP:PFM:REP 60->251|PF00561|3e-17|36.7|188/211|Abhydrolase_1| HM:PFM:NREP 1 HM:PFM:REP 59->264|PF00561|1.2e-27|25.2|206/231|Abhydrolase_1| RP:SCP:NREP 1 RP:SCP:REP 26->269|1a7uA|2e-30|25.4|244/277|c.69.1.12| HM:SCP:REP 4->279|1vj5A2|1.4e-52|29.7|269/0|c.69.1.11|1/1|alpha/beta-Hydrolases| OP:NHOMO 466 OP:NHOMOORG 332 OP:PATTERN ----------------1-----------------------------------1-------------11 -1--1---------32211-12--1-1111113333-366-121--------121-----1-2---2-211-----------2----------------1-1---3-1----------------1----1--1---3446311122-13-1-1----------1--1212-------------1--1----1--11111---1--111--1------1----1--11111122---1-11-11---11112121-------------------------------------------------------------------------------------------------1----11-1---------------11111-----12312---2-211------------113111-2212-13323121124211-12111------1--------------2------------------------------1--11-1---3111211-----11-2-------13-211-121----------2------------------1---1-1--------111--121-11211--1-43-1---------------------------11111--11-----1--1-112212221-1----1----------11--11111111111-111111111111111111111121---1111111111111111-1112221-----------------------2111--12-----1---11-----111-1-1-1-2-44341211311121111-------------1-----11-1-11----------------221111------------------------------------1------------ -----------------------121--------------------1----------1--------------1-1-----------------------------------2----------------------------------------------------21-------------------1-112---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 284 STR:RPRED 99.3 SQ:SECSTR cccccccccccccEEEEETTEEcEEEEEEEcccEEEEEEccTTccGGGGTHHHHHHHTEEEEEEccTTcGGGTTcccccHHHHHHHHHHHHHHTTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEcccccccHHHHHHHHHTTccccHHHHHHHHHHHHccHHTcHHHHHHHHHHHHHccccccHHHHHHTTcccccccGGGGGGccccEEEEEETTcccccHHHHHHHHHHcTTEEEEEETTccTTHHHHcHHHHHHHHHHHHHHcHcccHHHHHHHHHH## DISOP:02AL 1-1,273-287| PSIPRED ccccccccccccEEEEEEcccEEEEEEEccccccEEEEEccccccHHHHHHHHHHHcccEEEEEcccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHcHHHHHEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHccccEEEEEEcccccccHHHHHHHHHHccccEEEEEccccccHHHHcHHHHHHHHHHHHHHHHcccccccHHHHcccc //