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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87840.1
DDBJ      :             ABC transporter, membrane spanning protein (sugar)
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  481/915 : Eukaryota  12/199 : Viruses  1/175   --->[See Alignment]
f.38.1
:434 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   155->251 2d33D PDBj 3e-05 10.0 %
:RPS:SCOP  4->431 1pw4A  f.38.1.1 * 1e-09 13.0 %
:HMM:SCOP  1->431 1pw4A_ f.38.1.1 * 1.6e-63 25.9 %
:RPS:PFM   82->428 PF00083 * Sugar_tr 8e-10 30.2 %
:HMM:PFM   27->235 PF00083 * Sugar_tr 1.1e-25 23.2 198/451  
:HMM:PFM   296->430 PF07690 * MFS_1 1.1e-10 25.6 129/353  
:BLT:SWISS 21->431 YHJE_ECOLI 1e-99 47.4 %
:PROS 307->324|PS00216|SUGAR_TRANSPORT_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87840.1 GT:GENE AAK87840.1 GT:PRODUCT ABC transporter, membrane spanning protein (sugar) GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2052681..2053985 GB:FROM 2052681 GB:TO 2053985 GB:DIRECTION + GB:PRODUCT ABC transporter, membrane spanning protein (sugar) GB:PROTEIN_ID AAK87840.1 GB:DB_XREF GI:15157222 LENGTH 434 SQ:AASEQ MTDAVSRVSSTAGNSNAVKTNSPARVLTASLVGTTIEFFDFYVYATAAVLVFPALFFPNSDPTTALLASFATFSIAFFARPLGAVVFGHYGDRVGRKATLVAALLTMGVSTVVIGLLPTYETAGVLAPLLLALCRFGQGFGLGGEWGGAVLLATENAPPGKRSWYGMFPQLGAPVGLFLSSGVFWILLHFMSQEALLSWGWRIPFVASIILIAVGMWVRLSITETPDFQKAIEKEERVAVPIAELFRSHKRSLVLGTFVALATFVLFYIGTAYLLSYNVKVLKIPFLDALEVQILGSIVFGIFIPVAGKLAEKFGRREVLIVTTILIGLFSFLLPSLMTGGEGSIFVFAALAMMLMGMTYGLIGTALAAPFPTRVRYTGSSITFNMAGIFGASLAPYIATWLQVNYGMGYVGYYLCISALITLACIFLSRKDEV GT:EXON 1|1-434:0| BL:SWS:NREP 1 BL:SWS:REP 21->431|YHJE_ECOLI|1e-99|47.4|411/440| PROS 307->324|PS00216|SUGAR_TRANSPORT_1|PDOC00190| TM:NTM 12 TM:REGION 30->52| TM:REGION 65->87| TM:REGION 98->120| TM:REGION 133->154| TM:REGION 170->192| TM:REGION 204->226| TM:REGION 254->276| TM:REGION 287->309| TM:REGION 318->340| TM:REGION 348->370| TM:REGION 379->401| TM:REGION 408->429| SEG 65->79|allasfatfsiaffa| SEG 137->148|gqgfglggewgg| RP:PDB:NREP 1 RP:PDB:REP 155->251|2d33D|3e-05|10.0|90/499| RP:PFM:NREP 1 RP:PFM:REP 82->428|PF00083|8e-10|30.2|324/433|Sugar_tr| HM:PFM:NREP 2 HM:PFM:REP 27->235|PF00083|1.1e-25|23.2|198/451|Sugar_tr| HM:PFM:REP 296->430|PF07690|1.1e-10|25.6|129/353|MFS_1| GO:PFM:NREP 4 GO:PFM GO:0005215|"GO:transporter activity"|PF00083|IPR005828| GO:PFM GO:0006810|"GO:transport"|PF00083|IPR005828| GO:PFM GO:0016021|"GO:integral to membrane"|PF00083|IPR005828| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00083|IPR005828| RP:SCP:NREP 1 RP:SCP:REP 4->431|1pw4A|1e-09|13.0|408/434|f.38.1.1| HM:SCP:REP 1->431|1pw4A_|1.6e-63|25.9|405/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 2700 OP:NHOMOORG 514 OP:PATTERN ------3766887684-6233321-------------------------------------113---- -1--131588C-2154422-27--1U2222215999DNno--224-1--441PJL726-----328Q87311111222-13-A--111--------1--1-2---2-2-2-----------------1-1---1-------11111--------------121---------1-----1-----1------1-1222222211222222--11--222-23--1-------2-1111111111111111-112----11-2-----11-----11--------------------------------------------------------------------------------------------------1--44461442452F551-32323244444443435-66A55I7C221-666622433544B4-----5-----1-32333333333121-1442334441132458A74E4464473233-1564-63345WOOVQSCFIIEUUaLKMKIDIWJYAHCB-5GD832522611-8336---1132-------11--1-1--1----21--------------111111-----1-5455341-12212-2-------1-1---------------1--------------1---------87771874668577755-665567555667555455678766--27857676787767678833643441-333333333333----11111575711-11-------22211--188889581125-99B8BED91EGFF-B9A955449555----------1----54545544441111---------------------------------------------------------1- ---------------------------------------------------------------------------------------------1-1------------3------------------------------------------------------3------------11-----1----2---241---1 --------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------- STR:NPRED 90 STR:RPRED 20.7 SQ:SECSTR ##########################################################################################################################################################ccccEEEEccccTTccHHHHHHHHcccEEEEEEEEcc#######TTcTTcccHHHHHHHHHHHHHHHHcccccccHHHHHHTHHHHHHHHHHTTcTT####################################################################################################################################################################################### DISOP:02AL 1-23, 228-240| PSIPRED cccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccc //