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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87865.1
DDBJ      :             lytic murein transglycosylase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  61/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.2.1
:358 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   250->342 1slyA PDBj 3e-06 32.6 %
:RPS:PDB   243->351 132lA PDBj 2e-13 17.6 %
:RPS:SCOP  250->352 1qsaA2  d.2.1.6 * 1e-12 29.1 %
:HMM:SCOP  245->352 1qsaA2 d.2.1.6 * 7.4e-25 39.8 %
:RPS:PFM   253->321 PF01464 * SLT 5e-05 43.5 %
:HMM:PFM   251->346 PF01464 * SLT 2.4e-18 32.3 96/121  
:BLT:SWISS 216->322 YJBJ_BACSU 2e-08 37.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87865.1 GT:GENE AAK87865.1 GT:PRODUCT lytic murein transglycosylase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2081194..2082270 GB:FROM 2081194 GB:TO 2082270 GB:DIRECTION + GB:PRODUCT lytic murein transglycosylase GB:PROTEIN_ID AAK87865.1 GB:DB_XREF GI:15157253 LENGTH 358 SQ:AASEQ MRNSGKFRGRSALLLSSTVGLALALSACTSVEYAAKEGPNGPKIATVTSTSSAQTSTQPATAEAVAGATPAAPAVQTADAAASSQAAALPTAVAVKGGRVALPPASEIAAAAAIATQMQQPTEVAGAAATTAAPTTAAALVPTHTTPAAAAIETANAAAKPAMHNAAVDLPQVAAVKGSFPAAPPPPGSPSIGTELTAERKVIPLPKPDSTVLAYAAGPTNAALAAIRQNESMTAPLRTAPAGREKLSGLITKYATMYDVPEDLVHRVVQRESRYNPGAYSRGNFGLMQIRHATARSLGFDGPASGLFDAETNLKYAVKYLRGAWVVAGNDRDNAVRLYARGYYYDAKRKGMLHVLRN GT:EXON 1|1-358:0| BL:SWS:NREP 1 BL:SWS:REP 216->322|YJBJ_BACSU|2e-08|37.0|100/181| SEG 45->95|atvtstssaqtstqpataeavagatpaapavqtadaaassqaaalptavav| SEG 108->115|iaaaaaia| SEG 125->167|agaaattaapttaaalvpthttpaaaaietanaaakpamhnaa| SEG 178->191|gsfpaappppgsps| BL:PDB:NREP 1 BL:PDB:REP 250->342|1slyA|3e-06|32.6|92/618| RP:PDB:NREP 1 RP:PDB:REP 243->351|132lA|2e-13|17.6|108/124| RP:PFM:NREP 1 RP:PFM:REP 253->321|PF01464|5e-05|43.5|69/113|SLT| HM:PFM:NREP 1 HM:PFM:REP 251->346|PF01464|2.4e-18|32.3|96/121|SLT| RP:SCP:NREP 1 RP:SCP:REP 250->352|1qsaA2|1e-12|29.1|103/168|d.2.1.6| HM:SCP:REP 245->352|1qsaA2|7.4e-25|39.8|108/168|d.2.1.6|1/1|Lysozyme-like| OP:NHOMO 94 OP:NHOMOORG 61 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------1----------------------------------------------------------------------------------------------------------------------------------------------1----------------11112212111112-1122222222212-2211231122--222222222222------111111-11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 144 STR:RPRED 40.2 SQ:SECSTR ################################################################################################################################################################################################################cccccHHHHGGGTcccccHHHHHHHHHHTHHHHHcHHHHHHHHHTTcTTcTTccHHHHHHHHHHHTTcTTcEEEEEETTTTEETTTTccccccTTccTTcccGGGGGccccHHHHHHHHHHHTccHHHHHHTTcccGGGGGTTc###### DISOP:02AL 1-10, 23-219, 221-238| PSIPRED ccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccHHHHHHHHHHcccccccccccccEEEEEEcHHHHHHccccccHHHcccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccHHHHHHHHHHHHHHcc //