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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87941.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  417/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
c.1.33
:308 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   25->252 3gg0A PDBj 9e-19 29.7 %
:RPS:PDB   32->308 2basA PDBj 3e-26 18.6 %
:RPS:SCOP  32->252 2basA1  c.1.33.1 * 2e-31 24.2 %
:HMM:SCOP  15->278 2basA1 c.1.33.1 * 6.7e-34 24.8 %
:RPS:PFM   45->252 PF00563 * EAL 4e-20 32.8 %
:HMM:PFM   21->252 PF00563 * EAL 5.4e-36 30.2 222/236  
:BLT:SWISS 17->253 YFEA_ECOLI 4e-19 29.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87941.1 GT:GENE AAK87941.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2171033..2171959 GB:FROM 2171033 GB:TO 2171959 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK87941.1 GB:DB_XREF GI:15157345 LENGTH 308 SQ:AASEQ MAPKSIFSSLVREVDGTWSTAYQTFNLKSALQPIFRRTASGMLDIDSFEGLVRPHHNGEPVTPGEFFSLVASEDIENIDSILRTIHILNTGKLNRSRARIFVNFHPGLFQTPAKMRQEVERMRLTAHEAGMTADRIVCEISEKKASDTQMVADFAYHMHDIGFRVALDDYGAGDSDIDRVKLIKPDYVKFEAGWVRDFMQNSAGAALLRVIVRQFREDGIEPVFEGLETSWQVDLCEDLGVLLMQGYVLAKPELAPTSFDTRFPELGSEYFSPSRTERNTAAPAFSREDRAPDPHPLRQVRTFGKRGL GT:EXON 1|1-308:0| BL:SWS:NREP 1 BL:SWS:REP 17->253|YFEA_ECOLI|4e-19|29.8|225/729| BL:PDB:NREP 1 BL:PDB:REP 25->252|3gg0A|9e-19|29.7|209/392| RP:PDB:NREP 1 RP:PDB:REP 32->308|2basA|3e-26|18.6|264/393| RP:PFM:NREP 1 RP:PFM:REP 45->252|PF00563|4e-20|32.8|201/236|EAL| HM:PFM:NREP 1 HM:PFM:REP 21->252|PF00563|5.4e-36|30.2|222/236|EAL| RP:SCP:NREP 1 RP:SCP:REP 32->252|2basA1|2e-31|24.2|211/257|c.1.33.1| HM:SCP:REP 15->278|2basA1|6.7e-34|24.8|258/0|c.1.33.1|1/1|EAL domain-like| OP:NHOMO 1371 OP:NHOMOORG 421 OP:PATTERN -------------------------------------------------------------------- 2--31-----1----11----1--------------11--2---5-------222-----21---11-------------3-1144-1------------------------------------------------122------1622311-1-11------33--212-------------2-------6--11111-11-111--1------11-2312-12------31--------------------------1------------------------------------------------------------------13-------1-1-722------1--234311-3-1---1--------111366--------8851-3334361111111-11--76876159271-56654537752243521-1-1111211--------633--726----------11------------------132134221154434651111446B2222225472226--444554425--C-236226AF64-------1-337B-113--23125443-12142-221----11--4-------------------73251112216756663F8734566343343413435----338------3531-535554544344-5545443535545455455767-----431444444433434322122244--1111111-1111---3-----222241924---------------11111-----3733436887843325847---------7142166666868991221211111------5-331112------------------------------------------1------ --------------------------------------------------------------------------------------------------------------------------------------------------------------1----1---------2--------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 300 STR:RPRED 97.4 SQ:SECSTR #######HHHHHHHHHHHHHHHHHHHEEEEEEEEEEcTTcccccEEEEEEEEEEETTEEEEcHHHHcccccHHHHHHHHHHHHHHHHHHHTTccTTccEEEEccHHHHGGTTHHcTHHHHHHHHHHHHTTccGGGEEEEEccTTccccHHHHHHHHHHHTTTcEEEEEEETTTcccHHHHHHHcccEEEEEcTTTcTTTcccHHHHHHHHHHHHHHHHTcEEEEEccccHHHHHHHHHTTEEEEccTTTcccccccccTTTTHHHHHHHHHHHHHHHHHHHHHHHHH#HHHHHHHHHHHHHHHHTTcc DISOP:02AL 1-6, 267-296, 298-299, 304-308| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHcccEEEEEccEEEcccccEEEEEEEEEEEEEEcccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHcHHHHHHHHHHHHHHHHHHcccHHHEEEEEcHHHHccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEEEcHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccEEcHHHccccccHHHHHHHHHHHcccHHccccccccccccccccccccccccccHHHHcccccccc //