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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87982.2
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  10/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.151.1
:310 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   93->306 1e9nA PDBj 5e-09 17.5 %
:RPS:SCOP  94->310 1wduA  d.151.1.1 * 2e-10 17.7 %
:HMM:SCOP  90->307 1vybA_ d.151.1.1 * 1.5e-22 24.8 %
:HMM:PFM   95->306 PF03372 * Exo_endo_phos 1.7e-09 19.8 212/276  
:BLT:SWISS 191->308 Y3030_VIBC3 5e-05 31.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87982.2 GT:GENE AAK87982.2 GT:PRODUCT hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2210875..2211807 GB:FROM 2210875 GB:TO 2211807 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID AAK87982.2 GB:DB_XREF GI:159140388 LENGTH 310 SQ:AASEQ MTAKLSCMVSTAVAAVLFIASLRYVTDFWLLAFVTSFQLHIAIVCLLLSCLVFWLTRDVVTAALLVWALALAIHAVAMLMEFSTAATAAPGARPFRLLSFNVLMDNAANADAIADKILEAGADAVYLFEAAALQSVLPRLQQTYPHRLGCYEGTPGCDLVILSKRPLLEGRFHSLSDLRRDRFAIAHVDLDGTELTLAAGHITKPYFDDYHRDELDEVSEILFRVTGPLILGGDFNSASIAPDMRAFLAANDLKKATFEPATWPTEAGRFGIAIDHIFAREPATLMKTTRLSDSLGSNHFGLMADFMIGR GT:EXON 1|1-310:0| BL:SWS:NREP 1 BL:SWS:REP 191->308|Y3030_VIBC3|5e-05|31.6|114/281| TM:NTM 3 TM:REGION 2->24| TM:REGION 32->54| TM:REGION 62->84| SEG 59->77|vvtaallvwalalaihava| SEG 105->115|dnaanadaiad| RP:PDB:NREP 1 RP:PDB:REP 93->306|1e9nA|5e-09|17.5|212/274| HM:PFM:NREP 1 HM:PFM:REP 95->306|PF03372|1.7e-09|19.8|212/276|Exo_endo_phos| RP:SCP:NREP 1 RP:SCP:REP 94->310|1wduA|2e-10|17.7|198/217|d.151.1.1| HM:SCP:REP 90->307|1vybA_|1.5e-22|24.8|206/0|d.151.1.1|1/1|DNase I-like| OP:NHOMO 15 OP:NHOMOORG 10 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------111122-222--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 222 STR:RPRED 71.6 SQ:SECSTR ####################################################################################cccTTcccccEEEEEEEcccHHHHHHTTHHHHHHHHcccEEEEEcccccGGGccTHHHHccEEEEEccccccccEEEEEcccccEEEEccccGTTGGcccccEEEEEccccEEEEEEcGGGTTHHHHHHHHHHHHHHHHHHHHcEEEEEEccccccGGGccHHHHHcTTccccccEEccGGGTTTcEEccEEEEEcGGGGEEEEEEcTTccccccccEEEEE#### DISOP:02AL 1-5,82-94| PSIPRED ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEEEccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHcccccEEEEEccccccEEEEEEEcccEEEcccccccccccccEEEEEEEEccEEEEEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHcccccccccccccccccccccccEEEEEEEcccccEEEEEEEccccccccccEEEEEEEcc //