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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK87986.1
DDBJ      :             tRNA/rRNA methyltransferase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  730/915 : Eukaryota  15/199 : Viruses  0/175   --->[See Alignment]
c.116.1
:161 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   14->160 1mxiA PDBj 6e-25 37.2 %
:RPS:PDB   12->157 3e5yA PDBj 2e-26 34.2 %
:RPS:SCOP  1->157 1gz0A1  c.116.1.1 * 2e-32 21.0 %
:HMM:SCOP  1->160 1ipaA1 c.116.1.1 * 2e-38 27.2 %
:RPS:PFM   14->150 PF00588 * SpoU_methylase 1e-10 32.1 %
:HMM:PFM   12->150 PF00588 * SpoU_methylase 3.8e-33 26.8 138/142  
:BLT:SWISS 12->160 YIBK_ECOLI 3e-26 40.8 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK87986.1 GT:GENE AAK87986.1 GT:PRODUCT tRNA/rRNA methyltransferase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2217210..2217695 GB:FROM 2217210 GB:TO 2217695 GB:DIRECTION + GB:PRODUCT tRNA/rRNA methyltransferase GB:PROTEIN_ID AAK87986.1 GB:DB_XREF GI:15157398 LENGTH 161 SQ:AASEQ MPDTLPETGPNIRIALYQPDIPGNTGTILRLAACLGLGVDIIEPAGFDISDRNLKRAGMDYIAAAALTRHVSWDRFEEWRASTGRRLVLASTRAALPYTDITYRADDILLFGRESAGVPDHVHDKADERIIIPMVAGQRSINVAMSAAMVTGEALRQTAWS GT:EXON 1|1-161:0| BL:SWS:NREP 1 BL:SWS:REP 12->160|YIBK_ECOLI|3e-26|40.8|147/157| BL:PDB:NREP 1 BL:PDB:REP 14->160|1mxiA|6e-25|37.2|145/156| RP:PDB:NREP 1 RP:PDB:REP 12->157|3e5yA|2e-26|34.2|146/156| RP:PFM:NREP 1 RP:PFM:REP 14->150|PF00588|1e-10|32.1|134/143|SpoU_methylase| HM:PFM:NREP 1 HM:PFM:REP 12->150|PF00588|3.8e-33|26.8|138/142|SpoU_methylase| GO:PFM:NREP 3 GO:PFM GO:0003723|"GO:RNA binding"|PF00588|IPR001537| GO:PFM GO:0006396|"GO:RNA processing"|PF00588|IPR001537| GO:PFM GO:0008173|"GO:RNA methyltransferase activity"|PF00588|IPR001537| RP:SCP:NREP 1 RP:SCP:REP 1->157|1gz0A1|2e-32|21.0|157/166|c.116.1.1| HM:SCP:REP 1->160|1ipaA1|2e-38|27.2|158/0|c.116.1.1|1/1|alpha/beta knot| OP:NHOMO 781 OP:NHOMOORG 745 OP:PATTERN -------------------------------------------------------------------- -----11111111111111-111111111111111111111----11-1---111111-------11----1111111--11-------------------11-------111111111111111------1----22211---1-1111111111111111121111121111111111111111111111111111111111111111111111111111111-1111121111111111111111111111111111111111111111111111111111111111111111111111111111111111--11111111111111111112121111222211111-111111111121111111-111-1111111111111111111111111111111111-11111111111-22212212221111211-1---------------------111-----------------------------1221121111111111111111111111111111111111111111111111111111111121111111111111111--11111111111111111111----11-111-11111111-1-------1111111111111111111111111111111111111--111-1------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11221111----------1----1-111-111111111111-------------121 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111116111-121-2-11------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 158 STR:RPRED 98.1 SQ:SECSTR ##GGccccEcTcEEEEEccccHHHHHHHHHHHHHHTcEEEEEccccccccHHHHHHTTccHHHHHTcEEEccHHHHHHHHcccGGGEEEEccTTcEEGGGccccTTcEEEEEcTTTcccHHHTccGGGEEEcccccccccccHHHHHHHHHHHHHHHTTT# DISOP:02AL 3-7| PSIPRED cccccccccccEEEEEEcccccHHHHHHHHHHHHccccEEEEcccccccccHHHHHHHHcHHHHEEEEEEccHHHHHHHHHHcccEEEEEccccccccccccccccEEEEEccccccccHHHHHHcccEEEEcccccccEEcHHHHHHHHHHHHHHHHccc //