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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88045.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  34/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.6.2
:327 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   112->298 1cpoA PDBj 3e-16 11.7 %
:RPS:SCOP  98->313 1z7aA1  c.6.2.6 * 4e-15 14.4 %
:HMM:SCOP  1->324 1z7aA1 c.6.2.6 * 4.4e-29 23.1 %
:HMM:PFM   24->193 PF01522 * Polysacc_deac_1 2.6e-08 26.2 122/124  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88045.1 GT:GENE AAK88045.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2278094..2279077 GB:FROM 2278094 GB:TO 2279077 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK88045.1 GB:DB_XREF GI:15157467 LENGTH 327 SQ:AASEQ MFRPFAAFSLSLLAALPALAQEAQKPKQLVIVSFDGAGDNTLWERSRATGKQVGAHFTYFLACTLVMDRKTSAKTYQGPGQKAGRSNVGFGQSQEEVETRLRNIWAAYREGHEIGNHTCGHFDGGQWTAEQWDGEFTTFTSTLENAWQMIGKKGEEPEGWRDMVKKINGFRAPYLSQGPALTAAQKKHGFVYDATSITKGPEWPVEREGIQHFGLPLIPEGPGNRPIIAMDYNLFIRHSIGIETPDRAGEFEERAYTAFRNAFDRQYNGERIPLQMGFHFVKMNGGAYWNAYERLLREVCQKEDVACVSYAEAMPMIEARRKQKTEG GT:EXON 1|1-327:0| SEG 4->20|pfaafslsllaalpala| RP:PDB:NREP 1 RP:PDB:REP 112->298|1cpoA|3e-16|11.7|171/298| HM:PFM:NREP 1 HM:PFM:REP 24->193|PF01522|2.6e-08|26.2|122/124|Polysacc_deac_1| RP:SCP:NREP 1 RP:SCP:REP 98->313|1z7aA1|4e-15|14.4|187/301|c.6.2.6| HM:SCP:REP 1->324|1z7aA1|4.4e-29|23.1|260/0|c.6.2.6|1/1|Glycoside hydrolase/deacetylase| OP:NHOMO 38 OP:NHOMOORG 34 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1----------1--------1-------1--3221---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111111-111---------11--111111111111-----------------------------------------------------------------------------------------------------------------------------------------1----------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 266 STR:RPRED 81.3 SQ:SECSTR #########################ccEEEEEEEEc#cccTTHHHHHHHHHHTTcccEEEEcH##########################EEEcGHHHHHcHHHHHHHHHTTHHHHHTTcccTTcEEEcHHHHHHHHHHHHcccHHHHHHHHHHTccccEE##HHHHHHHHHHHHHHHHTEcGGGGcTTTTccccccccccTTcTcccTTcccccccccHHHHHHHHGGGTTccEEcHHHHHHHHHHHHHHHHHHTTTccccHHHHHHHHHHHHHHcTcTTTTTcccEEHHHHHHHHHHHHTcccEEEccHHHHHHHHHHH####### DISOP:02AL 1-2, 322-327| PSIPRED ccHHHHHHHHHHHHHccccccccccccEEEEEEEcccccccHHHHHHHHHHcccccEEEEEEEEEccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHccccccccccccHHHHHHHHHcccEEEEEccccccccccccccEEEcccccccccccccEEEEHHccHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccHHHHHHHHHHHHHHHccccEEEEEHHHHHHHHHccccccccc //