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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88075.2
DDBJ      :             two component sensor kinase/response regulator hybrid
Swiss-Prot:             

Homologs  Archaea  24/68 : Bacteria  849/915 : Eukaryota  125/199 : Viruses  1/175   --->[See Alignment]
a.30.2c.23.1d.110.3d.122.1f.55.1
:1231 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   496->574 1k0rA PDBj 7e-04 38.2 %
:BLT:PDB   679->906 3dgeA PDBj 3e-30 34.4 %
:BLT:PDB   927->1034 3dgfC PDBj 2e-10 33.0 %
:BLT:PDB   1100->1207 1m5tA PDBj 2e-14 37.5 %
:RPS:PDB   155->266 2cmnA PDBj 3e-04 8.5 %
:RPS:PDB   278->363 3c2wF PDBj 2e-10 10.5 %
:RPS:PDB   418->537 1dp8A PDBj 2e-04 11.8 %
:RPS:PDB   571->934 2bu6A PDBj 1e-39 12.8 %
:RPS:PDB   927->1051 1b00A PDBj 2e-14 22.4 %
:RPS:PDB   1100->1228 1bmtA PDBj 5e-18 9.1 %
:RPS:SCOP  229->387 2axtC1  f.55.1.1 * 1e-09 8.4 %
:RPS:SCOP  418->677 2axtC1  f.55.1.1 * 3e-11 10.2 %
:RPS:SCOP  663->748 2c2aA1  a.30.2.1 * 3e-20 32.6 %
:RPS:SCOP  756->907 1b3qA3  d.122.1.3 * 7e-25 13.8 %
:RPS:SCOP  925->1044 1a0oA  c.23.1.1 * 1e-17 25.8 %
:RPS:SCOP  1100->1219 1a0oA  c.23.1.1 * 1e-19 22.4 %
:HMM:SCOP  148->264 1p97A_ d.110.3.7 * 0.00045 24.8 %
:HMM:SCOP  280->387 1ll8A_ d.110.3.5 * 1.1e-15 26.4 %
:HMM:SCOP  397->525 1ew0A_ d.110.3.2 * 1.8e-06 27.0 %
:HMM:SCOP  557->671 1dp6A_ d.110.3.2 * 4.9e-06 19.8 %
:HMM:SCOP  663->748 2c2aA1 a.30.2.1 * 2.8e-23 44.2 %
:HMM:SCOP  735->919 1jm6A2 d.122.1.4 * 5.3e-44 42.0 %
:HMM:SCOP  923->1055 1s8nA_ c.23.1.1 * 2.5e-26 28.8 %
:HMM:SCOP  1098->1227 1s8nA_ c.23.1.1 * 2e-35 35.0 %
:RPS:PFM   283->370 PF08448 * PAS_4 2e-07 38.6 %
:RPS:PFM   681->745 PF00512 * HisKA 1e-06 35.4 %
:RPS:PFM   797->906 PF02518 * HATPase_c 1e-17 43.8 %
:RPS:PFM   928->1034 PF00072 * Response_reg 3e-10 31.8 %
:RPS:PFM   1100->1211 PF00072 * Response_reg 6e-16 35.8 %
:HMM:PFM   928->1041 PF00072 * Response_reg 9.4e-18 27.1 107/112  
:HMM:PFM   1100->1215 PF00072 * Response_reg 7.5e-29 36.4 110/112  
:HMM:PFM   793->907 PF02518 * HATPase_c 2.1e-28 44.0 109/111  
:HMM:PFM   26->79 PF08448 * PAS_4 6.1e-06 26.4 53/110  
:HMM:PFM   283->383 PF08448 * PAS_4 2.1e-13 27.0 100/110  
:HMM:PFM   414->459 PF08448 * PAS_4 0.00043 27.3 44/110  
:HMM:PFM   681->746 PF00512 * HisKA 1.4e-23 42.4 66/68  
:BLT:SWISS 269->339 PDE6_CAEEL 8e-05 35.2 %
:BLT:SWISS 663->1219 DHKJ_DICDI 5e-72 37.2 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88075.2 GT:GENE AAK88075.2 GT:PRODUCT two component sensor kinase/response regulator hybrid GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2306488..2310183) GB:FROM 2306488 GB:TO 2310183 GB:DIRECTION - GB:PRODUCT two component sensor kinase/response regulator hybrid GB:PROTEIN_ID AAK88075.2 GB:DB_XREF GI:159140432 LENGTH 1231 SQ:AASEQ MDCRGVEYRLTEGCGLLEKACRAVAALELPACIKDGELRYVVVNEAYGRVMGRAPSAFEGQTSLSLSGDIRDAEREDRERRSLVFATDEAIACHAALSAQSHMLRCERFIGDDGSLFLFEVFEEMPSAVSRKSAAVGGASDILFSSGVMDFIDAGIVVYDRDNQLVYCNARFAEFYSDLDIELKPGIRLEALMKTLYSSSVYRCAKNDGPSFEDWMQKQLHDFSLPYLERVEQFADGRWVRMVNKRLENGMLVGLRVDVTEFKAHETLLSTQIRETWLLRAALEQLPVGVFLRDQDRRLTYANAAYNTFLGGNLADHIGKTETEMFPQNGPRFRQENERILQTGEAIERTGNMPWRDGGAVPVITRLGRVATPDDEYYLVGSVTDVSLLQDREKALIAAQAEAEALHRQLQAVLRALPVGVLLLNADLVIEYVNPFFYQVWGEIGGEKSLVGKSYREFMEMNFDSGLYDYGDRPFDDVYEERVQRLLKADAFAPREVRSKSGKVTVISKTRLEGGKILSTYADVTDVRMRDAEISKARAELERVGEYMQGATRAMAQGLVLVEQGTIIMSNEAMARMFDVPPHLLEKGRNWAGFFAHCAGRGDFGTAAEAGETLRIWRENIAANRPFSWLVHVAGKSWLNLEATNSSGNYWLIIVTDVTEMKVREEELQRLLSRAEAADRAKSEFLANMSHEIRTPMNGVLGMAELLAKSKLDTRQKTFTDIIVKSGNALLTIINDILDFSKIEAGQMKLRSVPFDPAEAVEDVVSLLSSAALEKDIELIVRIDASVSGKVIGDAGRFRQIVTNIVGNAVKFTETGHVLVELSAQSAEASESIFSLRVEDSGIGIPVDKLETIFDKFSQVDGSATRRHEGTGLGLAITVGLVGLFDGKINVVSEVGRGSAFEVDIPFQVMERRRDVPLLSVAIDDIRVLVIDDNDVNRRILTEQLRSWGIDGHAVENGPSGIAVLQEAASLGFAIDAIILDYHMPVMNGLDVVERIRADKRFDDIAIVFLTSMDVVGDETLFTDLSVQAHLMKPARARLLRSTLFDVVRDVRLKRIRQHPLAQGTGGEKARPESRPAEKKQRAEAPATVPERSRPCLLDVLVAEDNDVNQIVFSQILQQAGLRFLIVGNGKRAVQAWEEYNPALILMDVSMPVMNGHQATQAIRAAEQAAGDSRHVPVIGVTAHTQEADRERCLEAGMDDYLSKPISPESLEDKIAQWLGENVLRRDAPGV GT:EXON 1|1-1231:0| BL:SWS:NREP 2 BL:SWS:REP 269->339|PDE6_CAEEL|8e-05|35.2|71/760| BL:SWS:REP 663->1219|DHKJ_DICDI|5e-72|37.2|516/2062| COIL:NAA 29 COIL:NSEG 1 COIL:REGION 389->417| TM:NTM 1 TM:REGION 412->434| SEG 69->81|dirdaeredrerr| SEG 393->412|ekaliaaqaeaealhrqlqa| SEG 821->832|elsaqsaeases| SEG 1158->1170|qatqairaaeqaa| BL:PDB:NREP 4 BL:PDB:REP 496->574|1k0rA|7e-04|38.2|76/326| BL:PDB:REP 679->906|3dgeA|3e-30|34.4|227/237| BL:PDB:REP 927->1034|3dgfC|2e-10|33.0|103/120| BL:PDB:REP 1100->1207|1m5tA|2e-14|37.5|104/123| RP:PDB:NREP 6 RP:PDB:REP 155->266|2cmnA|3e-04|8.5|103/117| RP:PDB:REP 278->363|3c2wF|2e-10|10.5|86/469| RP:PDB:REP 418->537|1dp8A|2e-04|11.8|110/118| RP:PDB:REP 571->934|2bu6A|1e-39|12.8|335/353| RP:PDB:REP 927->1051|1b00A|2e-14|22.4|120/122| RP:PDB:REP 1100->1228|1bmtA|5e-18|9.1|128/246| RP:PFM:NREP 5 RP:PFM:REP 283->370|PF08448|2e-07|38.6|88/111|PAS_4| RP:PFM:REP 681->745|PF00512|1e-06|35.4|65/69|HisKA| RP:PFM:REP 797->906|PF02518|1e-17|43.8|105/112|HATPase_c| RP:PFM:REP 928->1034|PF00072|3e-10|31.8|100/111|Response_reg| RP:PFM:REP 1100->1211|PF00072|6e-16|35.8|106/111|Response_reg| HM:PFM:NREP 7 HM:PFM:REP 928->1041|PF00072|9.4e-18|27.1|107/112|Response_reg| HM:PFM:REP 1100->1215|PF00072|7.5e-29|36.4|110/112|Response_reg| HM:PFM:REP 793->907|PF02518|2.1e-28|44.0|109/111|HATPase_c| HM:PFM:REP 26->79|PF08448|6.1e-06|26.4|53/110|PAS_4| HM:PFM:REP 283->383|PF08448|2.1e-13|27.0|100/110|PAS_4| HM:PFM:REP 414->459|PF08448|0.00043|27.3|44/110|PAS_4| HM:PFM:REP 681->746|PF00512|1.4e-23|42.4|66/68|HisKA| GO:PFM:NREP 10 GO:PFM GO:0000155|"GO:two-component sensor activity"|PF00512|IPR003661| GO:PFM GO:0007165|"GO:signal transduction"|PF00512|IPR003661| GO:PFM GO:0016020|"GO:membrane"|PF00512|IPR003661| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| RP:SCP:NREP 6 RP:SCP:REP 229->387|2axtC1|1e-09|8.4|157/447|f.55.1.1| RP:SCP:REP 418->677|2axtC1|3e-11|10.2|244/447|f.55.1.1| RP:SCP:REP 663->748|2c2aA1|3e-20|32.6|86/89|a.30.2.1| RP:SCP:REP 756->907|1b3qA3|7e-25|13.8|152/174|d.122.1.3| RP:SCP:REP 925->1044|1a0oA|1e-17|25.8|116/128|c.23.1.1| RP:SCP:REP 1100->1219|1a0oA|1e-19|22.4|116/128|c.23.1.1| HM:SCP:REP 148->264|1p97A_|0.00045|24.8|105/0|d.110.3.7|2/5|PYP-like sensor domain (PAS domain)| HM:SCP:REP 280->387|1ll8A_|1.1e-15|26.4|106/114|d.110.3.5|3/5|PYP-like sensor domain (PAS domain)| HM:SCP:REP 397->525|1ew0A_|1.8e-06|27.0|115/130|d.110.3.2|4/5|PYP-like sensor domain (PAS domain)| HM:SCP:REP 557->671|1dp6A_|4.9e-06|19.8|111/0|d.110.3.2|5/5|PYP-like sensor domain (PAS domain)| HM:SCP:REP 663->748|2c2aA1|2.8e-23|44.2|86/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 735->919|1jm6A2|5.3e-44|42.0|176/190|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| HM:SCP:REP 923->1055|1s8nA_|2.5e-26|28.8|125/190|c.23.1.1|1/2|CheY-like| HM:SCP:REP 1098->1227|1s8nA_|2e-35|35.0|123/190|c.23.1.1|2/2|CheY-like| OP:NHOMO 12974 OP:NHOMOORG 999 OP:PATTERN -----------------------22--113-5--11-1222243A-5A7OH4A--------------2 7Xt2A35555565446744-492288444445888938755BC95445565379A357118AP4D2799D5333355544H6431344fd*a-g113--D6Q8GCoToVk-------11111112553B966A7J6mkgddJ9Cy2*ZpzYXFHIAB222664QZCZ***K444344454334MD733343BDESSTSTSSTITTUWXPFGCBDCUUaACGM7JE988888ne5555555555555555554665755554435664476555565464999434321144444444444222222222322231133211156WGExMMLPRQQMMLFPQPAEFDOHI449CEJ4VSTKEB476576752-5PMMeYYP47666IHYVTHDDMPOOP9AAA9A99AAF-XPbRSRZhFMT6MLLPNMJNQNHIDEIFPF78EEFE8HA7777777755425*WT11122112334F1133112212112222117CF463211APHIMPPMDEEBNMVbIIIJ9HNQaLRQU-4MPHbFK65PPLLN4FKMDDB8Q411--1-166JER*U*sNHBmO7*aPNR3*n*wlttHTaWqX**Gf42231222221-1-------8C33A44ID7UNWN6URFDBBCDEGDHDCAFFEHCJQ--2B5JE------DE9BCA9DCCEDECFCD-CEDCDDDCCDCDDDEDEECEEG8A987CBACBCCBBBCCCCCDECC8BABD4-DDEFGFEBEGGF--456866677779Ik7N333111121121113AA9AB67473LLORTPThXfQUTXQUZVX2212122-2CKKJIFFFFFNNNSTOOMNPNNGGG4444--*1SSCDFG111111113-1-------------------------49545454442z2 -11-GF1------1PEEJCCACBE9C84433333335555545444EF99D97GAA854777532212141232211-1113334333-483E4727675946A8E-B2O------------------------------------------------9----4---------2--765U12224z6CRIDP81I3432 -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------3- STR:NPRED 1159 STR:RPRED 94.2 SQ:SECSTR ##################################TT##cHHHHHHHHHHHHHHHHHHHHHHHHH################HHHcccHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHTGGGccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHccTccGGGHHHHHHHHHHGGGTcccccccccccccTTcHHHHHHHHHHHHccccccTTTccccHHHHHHHHHHHHHHHHHHTTcccEcccccEEcTTEEEEEEcccccEEEEETTTTTcccccccTTccccTTTccHHHHHHHHHHHTcccccEEEEEEEETTEEEEEccccccHHHHHHHHHHHHHHHHEHHHHHHTTTTT####################cEEcTTEEEEEEcTTccEEEEETTHHHHTcccccTHHTccccHHHHHHHHHHHHHHHHccccccccEEEccccccEEEEEETEEEEEEEEcccccccHHHHHTHHHHHHHHHHHcccHHHHHHHHHHHHHHHTccEEEEEEEcTTccEEEEEEEEcTTHHHHHHHTTccccccccHHHTTcccccHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHTcHTccHTcHHHHHHHHHHHHHHHHHHGGGcccTTcTTTTHHHHHHHHHHHHHTTTHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccTTcEEEEEHHHHHHHHHHHHHHHHHHHHcccccEEEcccTTcccEEEEcHHHHHHHHHHHHHHHHHHHHHHTTTcccEEEEEEEcccEEEEEEEEEEEcccHHHHHHHTcTTGGGGcTTTTTTcccccHHHHHHHHHHHTTcEEEEEEETTEEEEEEEEEEcTTTcccccccccHHHHGGGccccccccccccccccccccEETTEEEEEEEHHHHHTcccccccccccccEEEEEEETTEEEEEEEcEEETGGEEEEEEEccccTTGGGGcccEEEEEEcTTccEEEEEcHHHHHHEEEEEEccGGGEEcTTcTcTTETcccHHHHHHHHHHHHHHHHcHHHHHHHcccEEcEEEEEcccHHHHHHHHHHHHHTTcEEEEEccHHHHHTTcccccccEEEEETTcTTccHHHHHHHHTTcHHHHTTTTTccEEEEEETTHHHHHHHTccccccEEEEEcccHHHHHHHHHHHHccTGGGEHHHHH DISOP:02AL 1-2,81-94,129-139,709-714,716-717,861-867,913-916,1221-1232| PSIPRED cccccHHHHHHHcccccHHHHHHHHHHcccEEEEcccccEEEEEHHHHHHHcccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEHHHHHHHHHcccHHHHHccccHHHHHHHHHHccccccccccccHHHHHHHHHHHccccccEEEEEEEccccEEEEEEEEcccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEEcHHHHHHHcccHHHHccccHHHHccccHHHHHHHHHHHHHcccEEEEEEEEEEccccEEEEEEEEEccccccccEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccEEEEcHHHHHHHcccccHHHHccccHHHHHccccccccccccccHHHHHHHHHHHHHHHcccccEEEEEEEccEEEEEEEEEcccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccEEEEccHHHHHHHcccHHHHHccccHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEccEEEEEEEEccccccEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEccHHHHHHHHHHHHHHHHHHcccEEEEEEcccccEEEEEcHHHHHHHHHHHHHHHEEEccccEEEEEEEEEcccccccEEEEEEEEccccccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEccccccccccccccccccccEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHcccccccccEEEEEcccccccHHHHHHHHHHcccccccEEEEEcccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHHcccccccEEEEEEccccHHHHHHHHHccccEEEEccccHHHHHHHHHHHHcccHHHHccccc //