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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88081.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  272/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.142.1
:464 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   59->347 1a9xA PDBj 2e-04 10.5 %
:HMM:SCOP  5->457 2io8A3 d.142.1.8 * 1.1e-68 36.1 %
:RPS:PFM   17->268 PF04169 * DUF404 7e-80 55.4 %
:RPS:PFM   320->462 PF04174 * DUF407 3e-51 62.9 %
:HMM:PFM   17->268 PF04169 * DUF404 4.5e-110 53.8 251/253  
:HMM:PFM   320->463 PF04174 * DUF407 8.5e-62 59.7 144/145  
:BLT:SWISS 4->463 Y335_SYNY3 e-129 49.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88081.2 GT:GENE AAK88081.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2315968..2317362 GB:FROM 2315968 GB:TO 2317362 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK88081.2 GB:DB_XREF GI:159140434 LENGTH 464 SQ:AASEQ MINADNAPRSPYENYNEWYSRQDRAHLIQKSKDAENIFRKTGITFAVYGHADSSEKLIPFDIIPRIISGREWRKLAQGIEQRVLALNAFLDDIYHKQEIIRAGRIPREIIEKNVAFLPEMIGFTPPGGVYTHIVGTDIVRTGEDQFYVLEDNARTPSGVSYMLENRETMMQMFPELFHENKVRRVEDYPYQLRQSLASLAPPGCTDKPRVAILTPGIYNSAYYEHSFLADMMGVELVEGSDLRVMDGKVKMRTTRGYEAIDVLYRRVDDDFLDPLTFRSDSALGVPGIMDVYRAGNITIANAPGTGISDDKAIYSYMPEIVEFYTGRKPLLENVPTWRCSEPDSLKYVLDNLAELVVKEVHGSGGYGMLVGPTASKKERALFAEKLKARPSNYIAQPTLSLSTVPIMVKNGIAPRHVDLRPYVLVSDKVKIIPGGLTRVALKQGSLVVNSSQGGGTKDTWVLED GT:EXON 1|1-464:0| BL:SWS:NREP 1 BL:SWS:REP 4->463|Y335_SYNY3|e-129|49.9|459/481| RP:PDB:NREP 1 RP:PDB:REP 59->347|1a9xA|2e-04|10.5|277/1058| RP:PFM:NREP 2 RP:PFM:REP 17->268|PF04169|7e-80|55.4|251/253|DUF404| RP:PFM:REP 320->462|PF04174|3e-51|62.9|143/145|DUF407| HM:PFM:NREP 2 HM:PFM:REP 17->268|PF04169|4.5e-110|53.8|251/253|DUF404| HM:PFM:REP 320->463|PF04174|8.5e-62|59.7|144/145|DUF407| HM:SCP:REP 5->457|2io8A3|1.1e-68|36.1|296/0|d.142.1.8|1/1|Glutathione synthetase ATP-binding domain-like| OP:NHOMO 414 OP:NHOMOORG 276 OP:PATTERN ------1-------11---------------------------------------------------- 1111----------21222-2222322222232222-122-212112--11-111--1------1------1---111---11---------------------1112-----------------1-111-1111111111---1-1-1111111111111111111----1--1111--1-11-1-----------------------------------1----------2----------------------------------------------------------------------------------------------------------------------------------------------2211------22222---22222----------1-22222122-21-22222222222222211211222211-11111111-22-2222------------------------------1121-----12222222222222222222-22221212-211122111122221-12-112-1-----------22--2------1--------1----------1--2------------------------11----22----------------------------112--------1----------------------------------11111-------------------1---------1------------------------112-2---------------11111-1---222222-32321111-2221----111--------------------------------2-22--------------------------------------------------2-- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 277 STR:RPRED 59.7 SQ:SECSTR ##########################################################ccEEEcccTTcEEEEEEEEEccccEEEEEEEEEcccTTccGGGccEEcccccHHHHHHHHHHHHHHHHHTTccEEEEEEEEEcc#ccEEEEEEEcc##ccTTHHHHHHHHcccHH#####HHHHHHHTTccHHHHTcccccccccEEEEEEEcGGGG##cTTcc##ccccccccccEEEEEEEccHHHHHHHHHHHTTcccccccEEEEEcGGGGTTHHHHHHHHHHTTcEEEEcHHHHHHHHTTTcccEEcccTTTccccHHHHHHTcccEEEEccccHHHHHHTHHH##################################################################################################################### DISOP:02AL 1-5,445-453| PSIPRED cccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEcccccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEHHHccccHHHHHcccccccccccccccccEEEEEEEEEEEEcccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHccccccccccEEEEEccccccHHHHHHHHHHHHHccEEccccccEEEccEEEEEEcccccEEEEEEEEEccccccHHHccccccccHHHHHHHHHcccEEEEEccccccccccHHHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHEEEEccccccccccccccccHHHHHHHHHHHHHcHHHcEEcccccccccEEEEccEEEEEEEEEEEEEEEcccEEEEccccEEcccccccEEEEcccccccccEEEEcc //