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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88126.2
DDBJ      :             ABC transporter, membrane spanning protein
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  195/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:291 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   93->214 3dhwA PDBj 7e-06 31.1 %
:RPS:SCOP  87->218 3dhwA1  f.58.1.1 * 2e-07 20.5 %
:HMM:PFM   105->286 PF00528 * BPD_transp_1 1.1e-24 26.4 178/185  
:BLT:SWISS 90->149 YTLD_BACSU 6e-07 33.3 %
:BLT:SWISS 120->219 Y355_HAEIN 1e-12 33.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88126.2 GT:GENE AAK88126.2 GT:PRODUCT ABC transporter, membrane spanning protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2359474..2360349 GB:FROM 2359474 GB:TO 2360349 GB:DIRECTION + GB:PRODUCT ABC transporter, membrane spanning protein GB:PROTEIN_ID AAK88126.2 GB:DB_XREF GI:159140456 LENGTH 291 SQ:AASEQ MTLLRHRILPILTVLLAILILWHLAVIYLNMPFARDQATRAGQTPGFFQLLPQTFAQERPVLPAPHQIAAELWDTTVNKAITSKRSLIYHAGITLSATLLGFAIGAVLGILLAVAIIHNRAMDRSVMPWIIASQTIPILAIAPMIIVVLNSIGISGLLPKALISTYLSFFPIVVGMVKGLRSPETLQLDLMHTYNASPAQIFWKLRWPSALPYLFTSLKIAIAIALVGAIVGELPTGAVAGLGARLLSGSYYGQTVQIWAALFMAAGVAALLVSIIGIAHAAVLKRMGARP GT:EXON 1|1-291:0| BL:SWS:NREP 2 BL:SWS:REP 90->149|YTLD_BACSU|6e-07|33.3|60/270| BL:SWS:REP 120->219|Y355_HAEIN|1e-12|33.3|96/245| TM:NTM 6 TM:REGION 7->29| TM:REGION 89->111| TM:REGION 129->151| TM:REGION 160->182| TM:REGION 218->240| TM:REGION 261->283| SEG 220->232|iaiaialvgaivg| SEG 260->272|aalfmaagvaall| BL:PDB:NREP 1 BL:PDB:REP 93->214|3dhwA|7e-06|31.1|122/203| HM:PFM:NREP 1 HM:PFM:REP 105->286|PF00528|1.1e-24|26.4|178/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 87->218|3dhwA1|2e-07|20.5|132/203|f.58.1.1| OP:NHOMO 373 OP:NHOMOORG 197 OP:PATTERN --------------------------------------------1----------------------- ----------1--------------3------1---2222-6-311--------------11--1--1-1-1------1---1-----------------------------------------1----------133321-------1----12-----------1---1-------------1---------22222222222222211----222--11---------14---------------------------------------1-------------1--------------------------111---111---114----------1111------1--1----22-1-----1--1--11--1-11------1-415--31--3-112111111-4-3333323-361-74446527762272---4423333323---------------1-----------------------------------2332--------------11------1-1-111-----1----2---62-1----1-------------1-111121----------------------1--------------------------------------------------------------1------------3----------------------------------222---------------------1-------------------------------------111-1----111-----------1-----2111--1111--1-111----------1111-----111----1--------------2------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 122 STR:RPRED 41.9 SQ:SECSTR ############################################################################################HHHHHHHHHHHTTGGGGGGGGGGccccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHH############################################################################# DISOP:02AL 1-1,291-292| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHcHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //