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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88151.2
DDBJ      :             ABC transporter, substrate binding protein (urea/amide)
Swiss-Prot:             

Homologs  Archaea  4/68 : Bacteria  262/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:429 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   33->390 1qo0B PDBj 1e-41 30.2 %
:RPS:PDB   17->386 3cznA PDBj 2e-64 14.2 %
:RPS:SCOP  29->379 1usgA  c.93.1.1 * 8e-50 19.2 %
:HMM:SCOP  30->403 1qo0A_ c.93.1.1 * 6.3e-85 30.7 %
:RPS:PFM   51->345 PF01094 * ANF_receptor 1e-09 27.2 %
:HMM:PFM   51->343 PF01094 * ANF_receptor 1.3e-06 16.7 287/348  
:BLT:SWISS 33->390 AMIC_PSEAE 5e-40 29.9 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88151.2 GT:GENE AAK88151.2 GT:PRODUCT ABC transporter, substrate binding protein (urea/amide) GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2384166..2385455) GB:FROM 2384166 GB:TO 2385455 GB:DIRECTION - GB:PRODUCT ABC transporter, substrate binding protein (urea/amide) GB:PROTEIN_ID AAK88151.2 GB:DB_XREF GI:159140470 LENGTH 429 SQ:AASEQ MMFRKTLSAALLGAILSTTAFHGAFAADDTIKVGVLHSLSGTMAISETTLKDAMLMLIDEQNKKGGVLGKKLEAVVVDPASDWPLFAEKARQLISQDKVAAVFGCWTSSSRKSVLPVFEELNSILFYPVQYEGEESSRNIFYTGAAPNQQAIPAVDYLASTEGVERWVLAGTDYVYPQTTNKILKAYLMSKGVKEEDIMINYTPFGHSDWQTIVSDIKKFGSAGKKTAVVSTINGDANVPFYKELANQGVKAEDIPVVAFSVGEEELAGLDTAPLVGHLAAWNYFQSVDAPINAEFIKTWHAFTKNDKRVTNDPMEAAYIGFNAWVKAVESAGTTDTDKVLDSIIGVSVPNLSGGYSTVMPNHHITKPVLIGEIQADGQFEIVQQTPQVVGDEWSDYLPDSKDLISDWRKPMSCGNFNVASGKCGGKGS GT:EXON 1|1-429:0| BL:SWS:NREP 1 BL:SWS:REP 33->390|AMIC_PSEAE|5e-40|29.9|351/385| BL:PDB:NREP 1 BL:PDB:REP 33->390|1qo0B|1e-41|30.2|351/374| RP:PDB:NREP 1 RP:PDB:REP 17->386|3cznA|2e-64|14.2|339/1014| RP:PFM:NREP 1 RP:PFM:REP 51->345|PF01094|1e-09|27.2|279/319|ANF_receptor| HM:PFM:NREP 1 HM:PFM:REP 51->343|PF01094|1.3e-06|16.7|287/348|ANF_receptor| RP:SCP:NREP 1 RP:SCP:REP 29->379|1usgA|8e-50|19.2|338/345|c.93.1.1| HM:SCP:REP 30->403|1qo0A_|6.3e-85|30.7|365/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 508 OP:NHOMOORG 269 OP:PATTERN ------------------------1---1--2--------------------------------1--- ----1--2112----------2---2------21112221------------1-----------1--2-------1----------------1-------------1--------------------------------------12-12--111--211111111-111111-11111-1-1--1--1---------------------1--------1------------1-------------------------------------------------------------------------------------------1--111111-1-1-----------1--1-----1--1---11---2---------------11BEE---66763----------2-35422338-2--633212354322641--2-222222-3222222222---11-1-----------------------------------12212222351111111173111111238232311111222--312125-21-2-1-----------1-22-11---111--111-2122-12-1--1--1-11----------------------------1122----1-----------------12----1-1------1121-21------------------------------11111-------------------2---------111111111111------------112121---------------------1-1--232232212323331434----------------------11----------------2------------------------------------------------------1- -----------------------------------------------------------------------------------------------------------1-------------------------------------------------------1------------------------2---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 385 STR:RPRED 89.7 SQ:SECSTR ################EEEEEEEEEEEEcEEcTTEEEEEEEEEcccccTTEEEcEEEEEcccccccccTTcccccEEEccccEEEEcTTccEEEEcTTcccEEccEEEEEccTTcccEEEEEEEEEEccccccccccccccccccccEEcccccccEEEEEccEcccEEEEEEETTEEEEEEEccHHTGGGTEccccEEEEEEccTTcTTEEEEEEEEEccEccccTTEEEEEETTTEEEEEEccTTccGGGGcEEEccEEEEEcccEEEEEEEcccEEEEcccTTEEEEEEEEEcccccccccccccccccccEEEEEEEEEEEcTTcccccTTccEEcHHHHHcEEcccHHHHHHHHHHHcccEEEEccccTTcccEEcTTccccccTTccHHHHHHTc############################ DISOP:02AL 1-5,425-430| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHHcccEEEEEEEccccccccEEEEEcccHHHHHHHHHHHHHHHccccEEEEEEccccccHHHHHHHHHHHHHccccEEEEEEEEcccccccHHHHHHHHHHHHcccccEEEEEEEccHHHHHHHHHHHHcccccccEEEEEccccHHHHHHcccHHHccEEEEcccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHccccccccccEEEEcccccEEEEEEEEEEEccccEEEEEccccccccccccccccccEEEEccccccccEEEEEEEEEEccccc //