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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88155.1
DDBJ      :             transcriptional regulator, LuxR family
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  840/915 : Eukaryota  66/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:309 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->140 3gt7A PDBj 2e-19 34.4 %
:BLT:PDB   248->302 2rnjA PDBj 7e-08 43.6 %
:RPS:PDB   13->132 3cnbA PDBj 1e-24 30.0 %
:RPS:PDB   245->302 3cloA PDBj 1e-15 39.7 %
:RPS:SCOP  8->125 1a0oA  c.23.1.1 * 4e-28 27.1 %
:RPS:SCOP  247->302 1a04A1  a.4.6.2 * 8e-14 33.9 %
:HMM:SCOP  8->143 1s8nA_ c.23.1.1 * 1.6e-38 40.6 %
:HMM:SCOP  226->305 1p4wA_ a.4.6.2 * 1.7e-18 40.0 %
:RPS:PFM   13->125 PF00072 * Response_reg 1e-20 43.2 %
:RPS:PFM   247->295 PF00196 * GerE 9e-09 51.0 %
:HMM:PFM   13->124 PF00072 * Response_reg 6.3e-31 37.3 110/112  
:HMM:PFM   247->301 PF00196 * GerE 6.7e-22 43.6 55/58  
:BLT:SWISS 13->148 CZCR_RALME 3e-19 38.3 %
:BLT:SWISS 174->302 SOLR2_RALSO 2e-12 41.3 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88155.1 GT:GENE AAK88155.1 GT:PRODUCT transcriptional regulator, LuxR family GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2391887..2392816 GB:FROM 2391887 GB:TO 2392816 GB:DIRECTION + GB:PRODUCT transcriptional regulator, LuxR family GB:PROTEIN_ID AAK88155.1 GB:DB_XREF GI:15157595 LENGTH 309 SQ:AASEQ MSGQVAAAPRDIVLLVDDSPDALGFLTDALEQSGFSALIATSGQAALNIAERITPDIILLDAVMPVMDGFETCRRLKANAAVAQVPVIFMTGLTETEHVVRALESGGVDYLTKPINIDELRARIRVHLSNARSAQSARVALDAAGRHLLAVRANGAIHWSTPQATRLVNAATGRDDGLEIVVAHISGWLKERATVDAARDAPLTITEAGRPALQLSFLGAMGPDEYLFRLTAANEKSDDHLLKSHFALTTRESEVLLWIAKGKSNRDIGDILGLSARTVNKHLEQIYVKLGVENRASAAVKAAHVLHQG GT:EXON 1|1-309:0| BL:SWS:NREP 2 BL:SWS:REP 13->148|CZCR_RALME|3e-19|38.3|133/225| BL:SWS:REP 174->302|SOLR2_RALSO|2e-12|41.3|121/236| BL:PDB:NREP 2 BL:PDB:REP 13->140|3gt7A|2e-19|34.4|128/132| BL:PDB:REP 248->302|2rnjA|7e-08|43.6|55/67| RP:PDB:NREP 2 RP:PDB:REP 13->132|3cnbA|1e-24|30.0|120/124| RP:PDB:REP 245->302|3cloA|1e-15|39.7|58/249| RP:PFM:NREP 2 RP:PFM:REP 13->125|PF00072|1e-20|43.2|111/111|Response_reg| RP:PFM:REP 247->295|PF00196|9e-09|51.0|49/57|GerE| HM:PFM:NREP 2 HM:PFM:REP 13->124|PF00072|6.3e-31|37.3|110/112|Response_reg| HM:PFM:REP 247->301|PF00196|6.7e-22|43.6|55/58|GerE| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00196|IPR000792| GO:PFM GO:0005622|"GO:intracellular"|PF00196|IPR000792| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00196|IPR000792| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00196|IPR000792| RP:SCP:NREP 2 RP:SCP:REP 8->125|1a0oA|4e-28|27.1|118/128|c.23.1.1| RP:SCP:REP 247->302|1a04A1|8e-14|33.9|56/67|a.4.6.2| HM:SCP:REP 8->143|1s8nA_|1.6e-38|40.6|133/190|c.23.1.1|1/1|CheY-like| HM:SCP:REP 226->305|1p4wA_|1.7e-18|40.0|80/0|a.4.6.2|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 10586 OP:NHOMOORG 926 OP:PATTERN -----------------------2-----2-2--12--1111174-3E1A859--------------1 6TT3E455555334A8877-7E2259777774CCCD9BBAABAGE86545569A935822BAD6F5CQIG5233344434C68-3444JJeS-E-----65I5BBX7cBM1-------------2312864455A5cddfY858n6*ZmoVWCLMHH454887QUFGyz*N444544444544DB83334398FTTUTUQTSHTSUTUQGKCB8BSTaA8DN6CA877878fi7777777677777775556453538843214555577414354242676534446632333343333333334444433362244421259NCJcIIINKJLILECRMM6796KGI23HBIG5XUQIC73878758C326KMDIGHI43433DBURTBADHODHJ9989999899C-HJRIHGDN6I71KBBKOLKSTPHGEDACEAB9A7988BB8888888857777bGE1111111111223311333332322111116C93674338OSTRTLQDDDCMMQZEDEE9GPRRJPPO22FJIbEHCCOKMNL9DGJCIBDN711111-1976HStCpjYCFhPB*cMLV2sbndcYdLIUOeTqzFT64331444553-11211111CA53356MG6FJOF8KFCG7BAABDEGFFBJEFLDMR--6CABD------C9AA696BAACBBCDAB-ADCABBBABCABBBBBBB8FGF79574BAABBABBABBBBBBC9998AA9B6-999AAAA98AAA--2A111112324DIjAM--13-11--1----3CBABD898A8MHNLPNObcbTOSVRQTRV2212132128ACALBBBBBGGKMLNOKKMKLHJI8878--v2CC7777111-11-131--------------------------2A222535444O3 ----44--------3---1---1-2-----------1111111-----12-1--11--------11-11111-11-----111111--------1-222--11112-1-1------------------------------------------------3----3-1-------3-1562A-111182271121-8---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 276 STR:RPRED 89.3 SQ:SECSTR HHcccccccTTcEEEEcccHHHHHHHHHHHHHHTcEEEEEccHHHHHHHHHHTcccEEEEETTcTTccHHHHHHHHHTcTTTTTcEEEEEEccccHHHHHHHHHTTccEEEEccccHHHHHHHHHHHHHTTcHHHHHHHHHHHHHHHHTTHHHHHHHHTTcccccccccccHHHHcccccccccHHHHHHHHHTTcc###############################EEEEEccccEEEEETTTTEEEEEEHHHHHHHHHHHTccEEEEEETTTTTccccccHHHHHHHGGGcccHHHHHHETHHc## DISOP:02AL 1-12, 131-142| PSIPRED cccccccccccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcccccccEEEccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcc //