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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88192.2
DDBJ      :             uracil-DNA glycosylase
Swiss-Prot:UNG_AGRT5    RecName: Full=Uracil-DNA glycosylase;         Short=UDG;         EC=3.2.2.-;

Homologs  Archaea  0/68 : Bacteria  630/915 : Eukaryota  182/199 : Viruses  1/175   --->[See Alignment]
c.18.1
:237 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->224 1eugA PDBj 6e-69 56.1 %
:RPS:PDB   7->226 1akzA PDBj 5e-97 53.4 %
:RPS:SCOP  7->226 1akzA  c.18.1.1 * 2e-97 53.4 %
:HMM:SCOP  10->233 3eugA_ c.18.1.1 * 3.5e-99 61.2 %
:RPS:PFM   62->211 PF03167 * UDG 1e-17 55.3 %
:HMM:PFM   59->214 PF03167 * UDG 1.5e-28 35.1 131/150  
:BLT:SWISS 1->237 UNG_AGRT5 e-140 100.0 %
:PROS 62->71|PS00130|U_DNA_GLYCOSYLASE

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88192.2 GT:GENE AAK88192.2 GT:PRODUCT uracil-DNA glycosylase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2426413..2427126) GB:FROM 2426413 GB:TO 2427126 GB:DIRECTION - GB:PRODUCT uracil-DNA glycosylase GB:PROTEIN_ID AAK88192.2 GB:DB_XREF GI:159140486 LENGTH 237 SQ:AASEQ MAEAGVKLEDSWKHVLSGEFASPYMQKLKEFLLAEKTAGKRIFPKGAEYFRALDLTPLDEVKVVILGQDPYHGLGQAHGLCFSVQPGVRIPPSLVNIYKELQSDLGIRPVKHGFLESWAKQGVLLLNSVLTVEEARAASHQGQGWEKFTDAVIRAVNDECDHVVFLLWGSYAQKKAAFVDQRKHLVLRSPHPSPLSAHNGFFGNGHFSKANAFLVSHGRDPIDWQLPDVVEGDKNLL GT:EXON 1|1-237:0| SW:ID UNG_AGRT5 SW:DE RecName: Full=Uracil-DNA glycosylase; Short=UDG; EC=3.2.2.-; SW:GN Name=ung; OrderedLocusNames=Atu2455; ORFNames=AGR_C_4459; SW:KW Complete proteome; Cytoplasm; DNA damage; DNA repair; Glycosidase;Hydrolase. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->237|UNG_AGRT5|e-140|100.0|237/241| GO:SWS:NREP 6 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0006974|"GO:response to DNA damage stimulus"|DNA damage| GO:SWS GO:0006281|"GO:DNA repair"|DNA repair| GO:SWS GO:0016798|"GO:hydrolase activity, acting on glycosyl bonds"|Glycosidase| GO:SWS GO:0008152|"GO:metabolic process"|Glycosidase| GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| PROS 62->71|PS00130|U_DNA_GLYCOSYLASE|PDOC00121| BL:PDB:NREP 1 BL:PDB:REP 11->224|1eugA|6e-69|56.1|214/225| RP:PDB:NREP 1 RP:PDB:REP 7->226|1akzA|5e-97|53.4|219/223| RP:PFM:NREP 1 RP:PFM:REP 62->211|PF03167|1e-17|55.3|123/147|UDG| HM:PFM:NREP 1 HM:PFM:REP 59->214|PF03167|1.5e-28|35.1|131/150|UDG| RP:SCP:NREP 1 RP:SCP:REP 7->226|1akzA|2e-97|53.4|219/223|c.18.1.1| HM:SCP:REP 10->233|3eugA_|3.5e-99|61.2|224/225|c.18.1.1|1/1|Uracil-DNA glycosylase-like| OP:NHOMO 887 OP:NHOMOORG 813 OP:PATTERN -------------------------------------------------------------------- ----111111111111111-11111111111111111111---11111111111111111111111122211111111----------221112111--111111111-1111111111111111-------------------1-1------------------------------------111------11111111111111111111111111111111122222211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11-1-------1-1-1---1111--11-11--11-------------11-------------------------------------11111111---1111111111111-------1----11-----------------------------------------------1111-1111111111111111111111111111111111111111111111112----111111111111------1---1--1--1111-1-1-----1----11--1111111111111111111111-----1111111111121111111111111111111-1-----11-1111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111112111-----11111111111111-1111111111111111111111111111111111111111111111111111111111111111111111111--11----11111111--111111-1111111111111111111------------- 1111221-311-111111111111111111111111111111111111111111-111111111111111111111111111111111-11211221111121111112141111111-111213312-372-222-11111111111--1111111-12231221-----2111111181111161-11132221115 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 227 STR:RPRED 95.8 SQ:SECSTR ###GGTTccHHHHHHHHHHHTcHHHHHHHHHHHHHHHHHccEEccGGGTTGGGTcccGGGccEEEEEccccccTTTccccTTcccTTccccHHHHHHHHHHHHHcTcccccccccHHHHHTTEEEEEccccEETTcTTTTTTccHHHHHHHHHHHHHHHccccEEEEEcHHHHHHGGGccTTTcEEEEEccccTTTGGGTTTTccHHHHHHHHHHHTTcccccTTccccc####### DISOP:02AL 1-1| PSIPRED cccccccccHHHHHHHHHHcccHHHHHHHHHHHHHHHcccEEcccHHHHHHHHccccHHHcEEEEEccccccccccccEEEEEccccccccHHHHHHHHHHHHHcccccccccccHHHHHHcccHHccEEEEcccccccHHHccHHHHHHHHHHHHHHccccEEEEEEcHHHHHHHHHcccccEEEEEEccccccccccccccccHHHHHHHHHHHccccccccccccccccccccc //