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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88202.1
DDBJ      :             two component sensor kinase
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  439/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.26.1a.30.2d.122.1
:464 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   219->443 2c2aA PDBj 2e-08 29.1 %
:RPS:PDB   233->457 3ehhB PDBj 9e-16 12.4 %
:RPS:SCOP  189->299 1csgA  a.26.1.2 * 3e-04 11.7 %
:RPS:SCOP  232->258 1joyA  a.30.2.1 * 2e-04 33.3 %
:RPS:SCOP  315->457 1id0A  d.122.1.3 * 1e-13 21.6 %
:HMM:SCOP  221->306 2c2aA1 a.30.2.1 * 2e-10 27.9 %
:HMM:SCOP  310->461 1ysrA1 d.122.1.3 * 4.8e-31 31.8 %
:RPS:PFM   35->152 PF08521 * 2CSK_N 3e-18 47.0 %
:RPS:PFM   353->448 PF02518 * HATPase_c 4e-08 32.3 %
:HMM:PFM   21->164 PF08521 * 2CSK_N 1.6e-46 45.5 143/146  
:HMM:PFM   358->450 PF02518 * HATPase_c 9.8e-20 35.9 92/111  
:HMM:PFM   240->303 PF00512 * HisKA 3.7e-08 29.7 64/68  
:HMM:PFM   171->234 PF00672 * HAMP 1.1e-07 31.2 64/70  
:BLT:SWISS 189->451 RSSA_SERMA 8e-25 27.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88202.1 GT:GENE AAK88202.1 GT:PRODUCT two component sensor kinase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2434187..2435581) GB:FROM 2434187 GB:TO 2435581 GB:DIRECTION - GB:PRODUCT two component sensor kinase GB:PROTEIN_ID AAK88202.1 GB:DB_XREF GI:15157650 LENGTH 464 SQ:AASEQ MRQAAYSLRRRLLGWLLISTAIIGCVALTDTWREAVNTANVVSDRVLSGSALAIAERVVVAEDGSLEVDIPYVALEMLTSAAQDRVFYRVDGPNGQFLTGYQTLPTVENTNGDTPAYRDAVFRDEPIRIAAIRRFASTGINSVPFSVTVAETTIARSQLAQAIILRSALRLLLMIVGAAIIVWIAVTISLRPLYRLSEAIAERSPNDLHPIRQSVPVEVENLVETVNSFMVRLQSALDALRHFTGNASHQLRTPLAIISTQLALSARAASLEEAQAAALKGGASVAHAEHILAQLLRMANIDAAGSSEKHDFSAIDLVAVAQNVTADFVPRAADAGIDLGFEGEGEATISAEPLLIGELIGNLVSNAINYAGRGAEVTVRVGGPAGAVWLEVEDNGPGIPPEKRAMVRQRFARGEANAAPGAGLGLAIIEEIAGLFGGRLTLEDGADGRGLKARVVFAAPERAA GT:EXON 1|1-464:0| BL:SWS:NREP 1 BL:SWS:REP 189->451|RSSA_SERMA|8e-25|27.3|260/469| TM:NTM 2 TM:REGION 12->34| TM:REGION 168->190| SEG 158->173|qlaqaiilrsalrlll| SEG 175->188|ivgaaiivwiavti| SEG 261->279|qlalsaraasleeaqaaal| SEG 414->430|geanaapgaglglaiie| BL:PDB:NREP 1 BL:PDB:REP 219->443|2c2aA|2e-08|29.1|203/240| RP:PDB:NREP 1 RP:PDB:REP 233->457|3ehhB|9e-16|12.4|185/186| RP:PFM:NREP 2 RP:PFM:REP 35->152|PF08521|3e-18|47.0|117/146|2CSK_N| RP:PFM:REP 353->448|PF02518|4e-08|32.3|96/112|HATPase_c| HM:PFM:NREP 4 HM:PFM:REP 21->164|PF08521|1.6e-46|45.5|143/146|2CSK_N| HM:PFM:REP 358->450|PF02518|9.8e-20|35.9|92/111|HATPase_c| HM:PFM:REP 240->303|PF00512|3.7e-08|29.7|64/68|HisKA| HM:PFM:REP 171->234|PF00672|1.1e-07|31.2|64/70|HAMP| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 3 RP:SCP:REP 189->299|1csgA|3e-04|11.7|111/120|a.26.1.2| RP:SCP:REP 232->258|1joyA|2e-04|33.3|27/67|a.30.2.1| RP:SCP:REP 315->457|1id0A|1e-13|21.6|139/146|d.122.1.3| HM:SCP:REP 221->306|2c2aA1|2e-10|27.9|86/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 310->461|1ysrA1|4.8e-31|31.8|148/0|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 1205 OP:NHOMOORG 444 OP:PATTERN --------------------------------------------1----1------------------ 211-11-12232-1----------1------13----311-1-----12---11------222-21-4122--------1421----111-----------1------21---------------21-1-1-11--111-1---211-5--------------1--1----------------112-----21-----------------1-------111---------------------------1------1------1-------------1--111-----------------------------------------1--2--------1-11-------1-41--14------2-1--2111---13112111--11-12634412-311211111111114-2443363336--8776434776442422221235332121111111122212112------------------------------122-235556DDFEDC68886AA9B999949DD9797C--8969366587689136411-221111111121-4481-1------1-11---11-3-2-1513323--1------------------------2214-24-111-111111-111111-1-12-1---1--1------31131112222222222-222222222222222222111223111222223222222222332211122--1---------------11111111133546---111--1--1--111111-2---3233434666454651554111111111-----1222212-129A535333333333----------------------------------------------1------1---1- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------1-----4---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 276 STR:RPRED 59.5 SQ:SECSTR ############################################################################################################################################################################################HHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHHHHGGGcccTTccTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHTTTTTcHHHHHHHHHHHHHHHHHHcccTHHHHHTTTTTccccHHHHHHHHHHHHHHTTcEEcccccccccccHHHHHHHHHHHHHHHHHHHHTcccTEEEEEEEEETTEEEEEEEEcccccccccccHHHHHTTTcccccccccccHHHHHHHHHHHTTcEEEEEcccTTEcEEEEEEEEccTTTc DISOP:02AL 201-216, 267-276, 414-421, 462-464| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEccHHHHHHHcccccccEEEEEEcccccEEEcccccccccccccccccEEcEEEccccEEEEEEEEEEcccccccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHccEEEEEEEccccEEEEcHHHHHHHHHHHHHHHHHccccccEEEEEEEEcccEEEEEEEEccccccHHHHHHHccccEEccccccccccHHHHHHHHHHHHcccEEEEEEcccccEEEEEEEEccccccc //