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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88209.2
DDBJ      :             ABC transporter, membrane spanning protein
Swiss-Prot:             

Homologs  Archaea  34/68 : Bacteria  457/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.22.1
:342 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   65->109,265->337 2nq2B PDBj 2e-07 31.9 %
:RPS:SCOP  71->337 1l7vA  f.22.1.1 * 3e-25 24.8 %
:HMM:SCOP  12->338 1l7vA_ f.22.1.1 * 1.6e-63 34.3 %
:RPS:PFM   71->337 PF01032 * FecCD 4e-23 30.7 %
:HMM:PFM   34->337 PF01032 * FecCD 4.8e-68 31.9 304/311  
:BLT:SWISS 43->342 YCLN_BACSU 2e-71 48.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88209.2 GT:GENE AAK88209.2 GT:PRODUCT ABC transporter, membrane spanning protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2442536..2443564 GB:FROM 2442536 GB:TO 2443564 GB:DIRECTION + GB:PRODUCT ABC transporter, membrane spanning protein GB:PROTEIN_ID AAK88209.2 GB:DB_XREF GI:159140494 LENGTH 342 SQ:AASEQ MAPLNTLRGRLNVYQFRNITNVKSLPLISALLLALALAITSLFVGVSNVSLATLFAQDTSADALRVLVVSRIPRTLALILAGSSMAIAGLIMQMLVRNRFVEPSTAGTTESAGLGLLVVTLLAPETPIFGKMLVAAAFALAGTALFLRILRQVPLRDVLLVPLIGIMLGGVIAAITTFFAYRFDLLQSLGAWMTGDFSGVLRGRYELLWVGFLFAIAAYLAADRFTVAGMGGDFTTNLGLNYRRVMALGLTIVSLVSAVVVVTVGMIPFLGLIVPNVVSLMIGDNMRRSVPWVATLGAVFVLSCDIIGRTVRAPYEIPIGTVVGVIGSALFLYLLLRKRHHA GT:EXON 1|1-342:0| BL:SWS:NREP 1 BL:SWS:REP 43->342|YCLN_BACSU|2e-71|48.3|298/316| TM:NTM 9 TM:REGION 27->49| TM:REGION 69->91| TM:REGION 116->138| TM:REGION 156->178| TM:REGION 204->226| TM:REGION 245->265| TM:REGION 271->286| TM:REGION 290->312| TM:REGION 315->336| SEG 24->42|slplisalllalalaitsl| SEG 112->123|aglgllvvtlla| SEG 133->147|lvaaafalagtalfl| SEG 250->264|ltivslvsavvvvtv| BL:PDB:NREP 1 BL:PDB:REP 65->109,265->337|2nq2B|2e-07|31.9|117/300| RP:PFM:NREP 1 RP:PFM:REP 71->337|PF01032|4e-23|30.7|267/313|FecCD| HM:PFM:NREP 1 HM:PFM:REP 34->337|PF01032|4.8e-68|31.9|304/311|FecCD| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF01032|IPR000522| GO:PFM GO:0006810|"GO:transport"|PF01032|IPR000522| GO:PFM GO:0016020|"GO:membrane"|PF01032|IPR000522| RP:SCP:NREP 1 RP:SCP:REP 71->337|1l7vA|3e-25|24.8|266/324|f.22.1.1| HM:SCP:REP 12->338|1l7vA_|1.6e-63|34.3|321/324|f.22.1.1|1/1|ABC transporter involved in vitamin B12 uptake, BtuC| OP:NHOMO 1094 OP:NHOMOORG 491 OP:PATTERN ---------------------111-111-1111--11-112111152633A71-2212222------- -----1247792431----------2----------2624-21-1112211-33-11-1132-41122361---------22-----------111-----11----11----------------13112111212-22111124-3-2111-----------22--22--------------1----22-1357787877848788975566668892545543111111CA244433443444444311333-1----1---22-1--1--------111-11111122222222222111111111111111111111112383255564664752311154435-1-211-1541--1111-11-2-2111-----21-1111---1213112222222222223-11-1112-11--13322-1-1112-----11311111-----------11----1----------------------------------11-----1111----------------1-----1----------2-----11--1-11-1111111----1--3222111--2-----------23----1111-231-22221----------1----11-1211-111--1-11--1----1----112---1-1-------6111121-222-222---1---212-2-122------12123112----------------2--211----122222222222--------------1317111131-----1--41122111-22------211412111-333---------1422-2222264822--------------------------------3-1-------------------------112-12-121--1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 117 STR:RPRED 34.2 SQ:SECSTR ################################################################ccGGGTcHHHHHHHHHHHHHHHHHHHHHHHHTTcTTccTTcccHH###########################################################################################################################################################ccccccTTTHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHH#ccccccHHHHHHHHHHHHHHHHHTc##### DISOP:02AL 1-3,340-343| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccc //