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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88210.1
DDBJ      :             ABC transporter, membrane spanning protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  194/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.22.1
:322 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  37->318 1l7vA  f.22.1.1 * 3e-08 18.7 %
:HMM:SCOP  1->319 1l7vA_ f.22.1.1 * 1.1e-49 27.7 %
:RPS:PFM   37->316 PF01032 * FecCD 8e-04 22.9 %
:HMM:PFM   30->318 PF01032 * FecCD 2.7e-51 26.5 283/311  
:BLT:SWISS 9->318 YCLO_BACSU 4e-62 39.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88210.1 GT:GENE AAK88210.1 GT:PRODUCT ABC transporter, membrane spanning protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2443557..2444525 GB:FROM 2443557 GB:TO 2444525 GB:DIRECTION + GB:PRODUCT ABC transporter, membrane spanning protein GB:PROTEIN_ID AAK88210.1 GB:DB_XREF GI:15157660 LENGTH 322 SQ:AASEQ MHERHPDRRAKTVLIILAAVSLICMAAFMTLGAKGSWSFVLPFRGIKLLSLLLVAYAIAVSTVLFQTVTNNRILTPSVMGFDSLYVLMQTGLIFVFGSATVVMIDPQLKFIVETALLVIFSALLYRWLFVGAERSLHLLVLVGIVFGVFFRSLSGFMQRVLDPNEYTVLQDVLFATFNSIDPTLLTISAIIIGVVTIIGLRLMHTLDVLSLGRATAIGLGVEYKRTVTIILVLVSVLVAVSTALVGPVMFFGLLVAALAHYLTGNGKHAYVLPAAILIAVICLVGGQVALERIFAFDTALSIIIEFLGGIVFIGLILKRGAR GT:EXON 1|1-322:0| BL:SWS:NREP 1 BL:SWS:REP 9->318|YCLO_BACSU|4e-62|39.2|309/315| TM:NTM 10 TM:REGION 11->33| TM:REGION 43->65| TM:REGION 79->101| TM:REGION 109->131| TM:REGION 137->159| TM:REGION 180->202| TM:REGION 212->234| TM:REGION 242->264| TM:REGION 269->291| TM:REGION 296->317| SEG 136->150|lhllvlvgivfgvff| SEG 186->199|tisaiiigvvtiig| SEG 227->245|vtiilvlvsvlvavstalv| RP:PFM:NREP 1 RP:PFM:REP 37->316|PF01032|8e-04|22.9|271/313|FecCD| HM:PFM:NREP 1 HM:PFM:REP 30->318|PF01032|2.7e-51|26.5|283/311|FecCD| GO:PFM:NREP 3 GO:PFM GO:0005215|"GO:transporter activity"|PF01032|IPR000522| GO:PFM GO:0006810|"GO:transport"|PF01032|IPR000522| GO:PFM GO:0016020|"GO:membrane"|PF01032|IPR000522| RP:SCP:NREP 1 RP:SCP:REP 37->318|1l7vA|3e-08|18.7|268/324|f.22.1.1| HM:SCP:REP 1->319|1l7vA_|1.1e-49|27.7|311/324|f.22.1.1|1/1|ABC transporter involved in vitamin B12 uptake, BtuC| OP:NHOMO 195 OP:NHOMOORG 194 OP:PATTERN -------------------------------------------------------------------- -----1-11111-1------------------------------1-111---11-11---1----1-------------------------------------------------------------------------------------------------------------------------------1111111111111111111111111--11111------1-111111111111111111111-------------------------111-----1111111111111----------------111---------1111111-1111------1--1-1----11--------------1-------11-11--------1--1-11111111111--------------11----------------11111------------------------------------------------------1------------------------------------------1--------------1111111----------------------------------1--------1111-------------------11----------11-------1----1-------------------------------------------------------11--1--------------------------111111111111-----------------1111111---------11111---11------1----1------------------11-1111121111----------------------------------1-------------------------------------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //