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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88218.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  138/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.151.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   49->272 1dnkA PDBj 4e-16 17.1 %
:RPS:SCOP  49->275 1vybA  d.151.1.1 * 2e-11 15.9 %
:HMM:SCOP  49->277 1i9zA_ d.151.1.2 * 1.8e-28 29.3 %
:HMM:PFM   49->273 PF03372 * Exo_endo_phos 1.8e-15 17.8 225/276  
:BLT:SWISS 41->274 YBHP_SHIFL 3e-08 30.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88218.2 GT:GENE AAK88218.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2453654..2454499) GB:FROM 2453654 GB:TO 2454499 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK88218.2 GB:DB_XREF GI:159140497 LENGTH 281 SQ:AASEQ MKKNGLLDDEKTALTKNTSLSAFVMQSLRDRRQRQNAAPATKDHSFPVIASYNVHKCVGRDRKFDPDRTSRVIQEIGADIIALQEADSRFGERTGLLDLARLERESGLVPVPVQAGVKAHGWHGNVVLFREGAVRDVHTLKLPGLEPRGALVVELDLKSGGTLRVIAAHFGLLRHSRAQQAKALVGLLEARNECATILMGDLNEWRLGNGSSLNTFRDAFGTLPPAVPSFPSNLPVLALDRIIANREGLIEQVEAHDSALARIASDHLPLKAAIRTDLLPA GT:EXON 1|1-281:0| BL:SWS:NREP 1 BL:SWS:REP 41->274|YBHP_SHIFL|3e-08|30.1|229/253| RP:PDB:NREP 1 RP:PDB:REP 49->272|1dnkA|4e-16|17.1|222/250| HM:PFM:NREP 1 HM:PFM:REP 49->273|PF03372|1.8e-15|17.8|225/276|Exo_endo_phos| RP:SCP:NREP 1 RP:SCP:REP 49->275|1vybA|2e-11|15.9|208/236|d.151.1.1| HM:SCP:REP 49->277|1i9zA_|1.8e-28|29.3|215/0|d.151.1.2|1/1|DNase I-like| OP:NHOMO 160 OP:NHOMOORG 138 OP:PATTERN -------------------------------------------------------------------- -11-------------------------------------------1---------------------1------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------1-2111111111-----1-------11111111111-11-1111-111-111222222222-----1-111111-1--------------12------------------------------11111----1111-11-----11-11111---1-2221--11112122111121--1211211-------1-1221---1-----------111------11111--1------------------------------1----1------------------------1-----------------------------------------------------------------------------------------------1------------------------------------11-1-----1----1111-111---------------------------1-11----------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 250 STR:RPRED 89.0 SQ:SECSTR ##########################ccccccccccccTTcccccEEEEEEEEEEEEcHHHHHcHHHHHHHHHHHTTccEEEEEEEccTTGcHHHHHHHHHHTcccTTccEEEEcccccccccEEEEEEcTTTEEEEEEEEccccccEEEEEEETTcccccEEEEEEccccGGGHHHHHHHHHHHHHHHHHHcccEEEEEEccccTTGGGGcHHHHcTTcEEcccTTccccccccccccEEEEEEcEccHHHHHTccHHHHHHHcccccEEEEEcc##### DISOP:02AL 1-2,6-6,29-45| PSIPRED cccccccHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccEEEEEEEEccccccccccccHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHccEEEEcccccccccccEEEEEEEccccccccccccccccccEEEEEEEEcccccEEEEEEccccccHHHHHHHHHHHHHHHHHcccccEEEEEEcccccccccHHHHHHHHHHHcccccccccccccccccEEEEEEccccEEEEEEEccccccccccccccEEEEEEEccccc //