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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88227.1
DDBJ      :             flavoprotein oxidoreductase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  265/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
b.45.1
:174 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   24->174 3cb0D PDBj 2e-31 43.0 %
:RPS:PDB   23->174 2d36A PDBj 1e-31 20.8 %
:RPS:SCOP  21->172 1uscA  b.45.1.2 * 4e-36 16.1 %
:HMM:SCOP  16->174 1uscA_ b.45.1.2 * 3.8e-47 28.5 %
:RPS:PFM   56->166 PF01613 * Flavin_Reduct 8e-09 29.7 %
:HMM:PFM   28->172 PF01613 * Flavin_Reduct 5.9e-36 31.0 145/155  
:BLT:SWISS 24->174 RUTF_ECO57 7e-38 50.3 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88227.1 GT:GENE AAK88227.1 GT:PRODUCT flavoprotein oxidoreductase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2465843..2466367) GB:FROM 2465843 GB:TO 2466367 GB:DIRECTION - GB:PRODUCT flavoprotein oxidoreductase GB:PROTEIN_ID AAK88227.1 GB:DB_XREF GI:15157681 LENGTH 174 SQ:AASEQ MQMMSLEKEAAMETKTAEQRSLDYRNAMARLGAAVNIVTTDGAAGRAGFAATAVCSVSDNPPTLLVCLNRNASAYKVVKANGVICINTLAAHHEVLSTLFGGKTPAEERFAAGSWGVLETGAPVLEDALVSFDCRIREAHDGGTHDILICTVVDMKINAGDEALMYFNRRYRVL GT:EXON 1|1-174:0| BL:SWS:NREP 1 BL:SWS:REP 24->174|RUTF_ECO57|7e-38|50.3|151/164| SEG 7->18|ekeaametktae| SEG 39->53|ttdgaagragfaata| BL:PDB:NREP 1 BL:PDB:REP 24->174|3cb0D|2e-31|43.0|151/161| RP:PDB:NREP 1 RP:PDB:REP 23->174|2d36A|1e-31|20.8|149/154| RP:PFM:NREP 1 RP:PFM:REP 56->166|PF01613|8e-09|29.7|111/150|Flavin_Reduct| HM:PFM:NREP 1 HM:PFM:REP 28->172|PF01613|5.9e-36|31.0|145/155|Flavin_Reduct| RP:SCP:NREP 1 RP:SCP:REP 21->172|1uscA|4e-36|16.1|149/178|b.45.1.2| HM:SCP:REP 16->174|1uscA_|3.8e-47|28.5|158/178|b.45.1.2|1/1|FMN-binding split barrel| OP:NHOMO 418 OP:NHOMOORG 268 OP:PATTERN -----------------1-------------------------------------------------- --1-2---------11111-12--1111111121112168---3---------31-----122-21--11------------1-----------------------------------------------------11111----1---------------------------------------------1---------------------------121----------------------------------------------------------------------------------------------------------------------------------------------------------211-1111121411-1-1-131--11-111113-22-32-2-52--7445444337522412--111--1---21222222-11-1111------------------------------1211-1----1123134----333111--11413141------111----1-2----------1111111----11-----------------------------1--------------------------------1-1--------------------------------------1---1-1111111112-121211121111222122222211111111111111111111121112222--111111111111-----------------1111---1-----1111111113111111111211---1-11121-----------------------1------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------9---------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 154 STR:RPRED 88.5 SQ:SECSTR ####################EEHHHHHHTTccEEcEEEEEEETTEEEEEEEcccEEEEETTEEEEEEEETTTTTTHHHHTccEEEEEEEccHHHHHHHHHccTccGTTGGGcccEEEcGGGcEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEEcccccccEEETTEEEcc DISOP:02AL 1-22| PSIPRED ccccccccccccccccccHHHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEEEEEEccccEEEEEEcccccHHHHHHHccEEEEEEccHHHHHHHHHHccccccHHHHcccccEEccccccEEcccEEEEEEEEEEEEEcccEEEEEEEEEEEEEccccccEEEEccEEccc //