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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88240.1
DDBJ      :             sugar kinase
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  220/915 : Eukaryota  20/199 : Viruses  0/175   --->[See Alignment]
c.72.1
:319 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->311 2rbcA PDBj e-151 100.0 %
:RPS:PDB   8->306 2c49B PDBj 2e-30 15.8 %
:RPS:SCOP  10->299 2fv7A1  c.72.1.1 * 1e-34 22.8 %
:HMM:SCOP  7->305 2fv7A1 c.72.1.1 * 2.2e-57 32.6 %
:RPS:PFM   45->256 PF00294 * PfkB 2e-14 36.4 %
:HMM:PFM   9->296 PF00294 * PfkB 6.6e-39 27.8 284/300  
:BLT:SWISS 10->300 YIHV_ECOLI 1e-31 31.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88240.1 GT:GENE AAK88240.1 GT:PRODUCT sugar kinase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2477336..2478295 GB:FROM 2477336 GB:TO 2478295 GB:DIRECTION + GB:PRODUCT sugar kinase GB:PROTEIN_ID AAK88240.1 GB:DB_XREF GI:15157696 LENGTH 319 SQ:AASEQ MVKEPGGKHVLCVGAAVLDTLFRVADMPKGEGKVLPYEVLQIAEGMASSAAYAVHRMGGRASLWGAVGDDETGTRILRDLSESGIDTSGMTVAPGARSALSTIIIDNRGERLIVPFYDHRLHEKKRACTPEDIALFDAVLVDVRWPELALDVLTVARALGKPAILDGDVAPVETLEGLAPAATHIVFSEPAATRLTGLETVKDMLPVLHARYPQTFIAVTAGPAGCWWTEADDPTVHFQTTMQVEAVDTLAAGDIFHGTFALAMAEGMQSRAAVRLSSVAAALKCTVFGGRIGAPTREETEEAMRQWLERESEPALRAS GT:EXON 1|1-319:0| BL:SWS:NREP 1 BL:SWS:REP 10->300|YIHV_ECOLI|1e-31|31.2|285/298| SEG 270->283|sraavrlssvaaal| BL:PDB:NREP 1 BL:PDB:REP 6->311|2rbcA|e-151|100.0|297/297| RP:PDB:NREP 1 RP:PDB:REP 8->306|2c49B|2e-30|15.8|292/298| RP:PFM:NREP 1 RP:PFM:REP 45->256|PF00294|2e-14|36.4|206/295|PfkB| HM:PFM:NREP 1 HM:PFM:REP 9->296|PF00294|6.6e-39|27.8|284/300|PfkB| RP:SCP:NREP 1 RP:SCP:REP 10->299|2fv7A1|1e-34|22.8|289/308|c.72.1.1| HM:SCP:REP 7->305|2fv7A1|2.2e-57|32.6|298/0|c.72.1.1|1/1|Ribokinase-like| OP:NHOMO 320 OP:NHOMOORG 246 OP:PATTERN --1----1--------11--1---------1------------------------------------- --2--------1-1----------------------1--------1-----------------------------------------------1------------------------------------------122-------112--------------------11----------------------1---------------111111---111-1--------12-------------------1121----11111122----211----11--1-1-------------------------------------------------1--1---1111-1------1----1--1---111--------11--------3--1-1111111111111-113----------31-211-11-222----------11-11-----------11-1--1----------------------------------------1--1-11------1---------2------------------11--------1-----------------------1----1-1------------11-----------------------------1---------------1------1-----------------111-11-2222222222-222222222222222222111111112221222222222222212212222--11111111-111-------------1---------1---1-----------------11111111-1111--111----1---1-11------111-------------------1---------------------1------------------------------11- ------1-1------1--------------------------------11---------------------------------------------------------------1-1------1--1--------------2--1---------1--11----------1----------------2--1-3-----11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 314 STR:RPRED 98.4 SQ:SECSTR ####cccEEEEEEcccEEEEEEEccccccTTccccccccEEEEEcHHHHHHHHHHHTTcEEEEEcEEcTTccccHHHHHHHHTTcccTTcEEcccccccEEEEEEcTTccEEEEEEcGGGGGGcccccccEEEEEEccccHHHHHHHHHHHHTTTcEEEEccGGGGGGGccHHHHHHHHHTccEEEEEHHHHHHHHHHHTccHHHHHTTccETTcEEEEEcGGGcEEEEcccccEEEEcccccccccccTTHHHHHHHHHHHHHHTTccHHHHHHHHHHHHHHHTTcccccTTcccHHHHHHHHHHEEccccHHHHHH# DISOP:02AL 1-5, 317-319| PSIPRED ccccccccEEEEEccHHHHHHcccccccccccEEEEcEEEEEccccHHHHHHHHHHccccEEEEEEccccHHHHHHHHHHHHccccEEEEEEccccccEEEEEEEcccccEEEEEEcccccccHHHcccHHHHHHccEEEEEcccHHHHHHHHHHHHHccccEEEccccccHHHHHHHHHcccEEEEcHHHHHHHHccccHHHHHHHHHHHccccEEEEEEccccEEEEEccccEEEEcccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHccccccccc //