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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88250.2
DDBJ      :             dipeptidase
Swiss-Prot:             

Homologs  Archaea  26/68 : Bacteria  318/915 : Eukaryota  133/199 : Viruses  0/175   --->[See Alignment]
c.1.9
:346 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->346 3fdgB PDBj e-105 53.8 %
:RPS:PDB   4->345 3b40A PDBj 4e-31 26.8 %
:RPS:SCOP  7->344 1itqA  c.1.9.7 * 1e-96 27.6 %
:HMM:SCOP  7->344 1ituA_ c.1.9.7 * 3.7e-91 37.6 %
:RPS:PFM   8->340 PF01244 * Peptidase_M19 5e-70 47.6 %
:HMM:PFM   4->341 PF01244 * Peptidase_M19 2.3e-114 44.9 316/320  
:BLT:SWISS 90->344 YPQQ_KLEPN 9e-66 47.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88250.2 GT:GENE AAK88250.2 GT:PRODUCT dipeptidase GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2488378..2489418 GB:FROM 2488378 GB:TO 2489418 GB:DIRECTION + GB:PRODUCT dipeptidase GB:PROTEIN_ID AAK88250.2 GB:DB_XREF GI:159140513 LENGTH 346 SQ:AASEQ MTDQKPVPVFDGHNDVLLRLWRSGNTSPETLLIEGDTVGHIDLPRARKGGLAGGLCAIYVPSPSMEKDANGDFSTPTEADALKATLGMAALLFRAEKQSAGALKVCRTAADIRSAMAEGAFASVFHIEGAEAIGDDLDALHVLHEAGLRTLGPVWSRPNIFAYGVPFRFPSTPDIGPGLTDTGKRLVKTCNELKIMVDLSHMNEQGFWDIAKISDAPLVASHSNAYALCNHSRNLTDRQLDAIRDTGGLAGINFGVLFLRQDGVKNPNTDLNELVRHVDYIVNRIGIDHVALGSDFDGTTIPAAMKDAGDLQLLVEALRKGGYDNEALARICHGNWVRVLEKTWGA GT:EXON 1|1-346:0| BL:SWS:NREP 1 BL:SWS:REP 90->344|YPQQ_KLEPN|9e-66|47.5|255/271| BL:PDB:NREP 1 BL:PDB:REP 7->346|3fdgB|e-105|53.8|338/348| RP:PDB:NREP 1 RP:PDB:REP 4->345|3b40A|4e-31|26.8|332/400| RP:PFM:NREP 1 RP:PFM:REP 8->340|PF01244|5e-70|47.6|307/312|Peptidase_M19| HM:PFM:NREP 1 HM:PFM:REP 4->341|PF01244|2.3e-114|44.9|316/320|Peptidase_M19| GO:PFM:NREP 4 GO:PFM GO:0006508|"GO:proteolysis"|PF01244|IPR008257| GO:PFM GO:0008235|"GO:metalloexopeptidase activity"|PF01244|IPR008257| GO:PFM GO:0008239|"GO:dipeptidyl-peptidase activity"|PF01244|IPR008257| GO:PFM GO:0016805|"GO:dipeptidase activity"|PF01244|IPR008257| RP:SCP:NREP 1 RP:SCP:REP 7->344|1itqA|1e-96|27.6|322/369|c.1.9.7| HM:SCP:REP 7->344|1ituA_|3.7e-91|37.6|322/0|c.1.9.7|1/1|Metallo-dependent hydrolases| OP:NHOMO 721 OP:NHOMOORG 477 OP:PATTERN 111---1111111111-21111--------------------------------11211111------ -33-1---------1---------11-----1----12-1----1--1-11-----------2---1122----------11---------2-311-----1-121-31111---111111111------------11111---121--1---------------------------------21-11---11-1111111111111111111--11111112--11111142------------------------------------------------------------------------------------------13--1111111111113111111-11--1--1-111111111-1111--15--1112------------------11111111112--------1122-2223111111241111112411111341111111111111-1------------------------------12233--221-2111111111111211111-1111-1------1------1---1-----------------------1-----------------1---1111113-1------------------------------1--212111111111-111111-1112--1-----------111--1------------------------------111----------------------------------------------2-1--2------111---------------111-111-11112222242223232-322----------1--------1-1--1121211111-------1----------------1---------------------------1---1------ --------------1111111123132111111323122222211111232323112-1111-11-11----1-------1-----11-12111211113--1111-2-2A2321321222123532517G3-435-2223213-1332131-222221122132625449--22--------------1--------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 343 STR:RPRED 99.1 SQ:SECSTR ###HTTcccEEEEEcccTTTTcTTcccTTHHcTTccccccccHHHHHHHTccEEEEEEEcccccccccccTTHGcccHHHHHHHHHHHHHHHHHHHHHcTTTEEEcccHHHHHHHHHTTcEEEEEEEEccGGGTTcTHHHHHHHHTTccEEEccccccccccccccGGGTccTTTTccccHHHHHHHHHHHHHTcEEEcTTccHHHHHHHHHHccccEEEEEEccTTTcccTTcccHHHHHHHHHTTcEEEEEccHHHHcGGGGGccHHHHHHHHHHHHHHHHTccGGGEEEEcccTTTccccTcccGGGHHHHHHHHHHHTccHHHHHHHTTHHHHHHHHHHHHc DISOP:02AL 1-3| PSIPRED ccccccccEEEcHHHHHHHHHHccccccccccccccccccccHHHHHcccccEEEEEEEEccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHccccEEEEccHHHHHHHHHcccEEEEEEccccccccccHHHHHHHHHccccEEEccccccccccccccccccccccccccccHHHHHHHHHHHHcccEEEEccccHHHHHHHHHHccccEEEEcccHHHcccccccccHHHHHHHHHcccEEEEEccHHHccccccccccccHHHHHHHHHHHHHHHccccEEEcccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHcc //