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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88267.2
DDBJ      :             two component response regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  827/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:213 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   20->212 1ys6B PDBj 5e-18 33.2 %
:RPS:PDB   17->96 3cwoX PDBj 1e-10 15.0 %
:RPS:PDB   117->207 2d1vA PDBj 9e-17 28.6 %
:RPS:SCOP  18->96 1p2fA2  c.23.1.1 * 3e-09 24.1 %
:RPS:SCOP  109->212 1ys6A1  a.4.6.1 * 6e-22 24.0 %
:HMM:SCOP  1->167 1s8nA_ c.23.1.1 * 9.3e-25 28.3 %
:RPS:PFM   35->96 PF00072 * Response_reg 5e-04 32.3 %
:RPS:PFM   134->207 PF00486 * Trans_reg_C 9e-11 41.9 %
:HMM:PFM   134->208 PF00486 * Trans_reg_C 3e-23 37.3 75/77  
:HMM:PFM   4->101 PF00072 * Response_reg 8e-22 31.6 98/112  
:BLT:SWISS 17->211 Y4XI_RHISN 8e-30 34.4 %
:PROS 77->102|PS00217|SUGAR_TRANSPORT_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88267.2 GT:GENE AAK88267.2 GT:PRODUCT two component response regulator GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2508595..2509236) GB:FROM 2508595 GB:TO 2509236 GB:DIRECTION - GB:PRODUCT two component response regulator GB:PROTEIN_ID AAK88267.2 GB:DB_XREF GI:159140519 LENGTH 213 SQ:AASEQ MARALLEALRRRDVLADHVSTISDADALARDGSYDVLVLDRRLPDGEGLNLVASLRRSKNSVPILVLTALGNVDHRVDGLDAGADDYLAKPFAIEELLARLRALHRRGPSLADKYTRFGNLGIDPRSNEVSVAGSSIELRRREYLVLEALMRRPNRIVTRSSLIEAVYTLDDEIESNALDAHISRIRKKLAQAEATVEIRAVRNIGYLVRLKT GT:EXON 1|1-213:0| BL:SWS:NREP 1 BL:SWS:REP 17->211|Y4XI_RHISN|8e-30|34.4|195/226| PROS 77->102|PS00217|SUGAR_TRANSPORT_2|PDOC00190| SEG 2->16|arallealrrrdvla| SEG 78->89|dgldagaddyla| SEG 97->107|llarlralhrr| BL:PDB:NREP 1 BL:PDB:REP 20->212|1ys6B|5e-18|33.2|193/227| RP:PDB:NREP 2 RP:PDB:REP 17->96|3cwoX|1e-10|15.0|80/236| RP:PDB:REP 117->207|2d1vA|9e-17|28.6|91/103| RP:PFM:NREP 2 RP:PFM:REP 35->96|PF00072|5e-04|32.3|62/111|Response_reg| RP:PFM:REP 134->207|PF00486|9e-11|41.9|74/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 134->208|PF00486|3e-23|37.3|75/77|Trans_reg_C| HM:PFM:REP 4->101|PF00072|8e-22|31.6|98/112|Response_reg| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 18->96|1p2fA2|3e-09|24.1|79/120|c.23.1.1| RP:SCP:REP 109->212|1ys6A1|6e-22|24.0|104/106|a.4.6.1| HM:SCP:REP 1->167|1s8nA_|9.3e-25|28.3|166/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 5578 OP:NHOMOORG 830 OP:PATTERN -------------------------------------------------------------------- 5BA4A34455644467766-6A3358666665A8987AAA45886536333355723611A9C5B5BFA75244443345B85132453343-111----16-2191957---------------22122212111CABAA31393F9I9BA7559A623666984AGGK33524333434238945523-936DDDDDBBC7D9EFDA574455AEI358D4A8433435PK5545555455555555446453428621222222266323343353888544357755555545555344444444444452321144443C8ADAAAEGBE8B54AII3453BA74389B22ML767223346452-2882257744444494FAA9677D77E77677777669-9BC8DDD98G51FHHFBBCGFD9BBG364546A69A566666666666898698611111111111122222222222221111135B549CB8EJILKLHDBBB9HHIJCACC7CIJKDGHO-1DHDD8DCAPBCDH5DG955367312111117428AA65212211253222-735675755543464155422222221--1-------3415622CB58979688589EDB7DADCCCCECAECB--21225------88897968889899A88-8A9888888A888888887C9B8B4348788888878888888A76688883-866666665766---622222222266B8C111111122221--27645737444A6EDGFFJJKAHHJKDEGH2212132123788A8788768A89GHB9C999995545--41223344----------1-------------------------2512122242373 --------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------9-----2---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 196 STR:RPRED 92.0 SQ:SECSTR ################EccccccTHHHHHHHHHHcEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccccTTEETTEEEETTTTEEEETTEEccccHHHHHHHHHHHHTTTccccHHHHHHHHHcTTccccTHHHHHHHHHHHHHHcccTTcccEEEETTTEEccEcc# DISOP:02AL 110-114,213-214| PSIPRED cHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHcccccccccEEEccEEEEcccEEEEEccEEEcccHHHHHHHHHHHHcccccccHHHHHHHHcccccccccccHHHHHHHHHHHccccccccEEEEEcccEEEEEEcc //