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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88289.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  149/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
d.154.1
:334 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   6->317 2drhB PDBj 2e-14 21.4 %
:RPS:SCOP  1->334 1b65A  d.154.1.1 * 4e-26 20.7 %
:HMM:SCOP  1->332 1b65A_ d.154.1.1 * 5.1e-71 41.4 %
:RPS:PFM   6->283 PF03576 * Peptidase_S58 3e-28 46.3 %
:HMM:PFM   5->321 PF03576 * Peptidase_S58 1.9e-76 37.3 292/326  
:BLT:SWISS 1->138,233->282 Y1167_MYCLE 2e-11 58.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88289.2 GT:GENE AAK88289.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2536866..2537870) GB:FROM 2536866 GB:TO 2537870 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK88289.2 GB:DB_XREF GI:159140529 LENGTH 334 SQ:AASEQ MAAHNNLLTDIDGILVGNVTDLSLGSGVTAIVFEKPAVASGSVLGGAPGGRDTGLLDPSMTVETVDALVLSGGSAFGLDAAGGVQAGLREIGRGLQVGSTRVPIVPQAILMDMLNGGNKDWGLHSPYREMGYAAFKAAGRDPFELGTAGAGTGATTATFKGGLGSASAISSGGYKVAAIVAVNALGSATVGTSRHFWSAPFEVHGEFGDHGFPARFTADDTALRLKGVNLTATTIGAVVTDAVLTKAQAHRLSIMAHDGLARAVLPAHLPSDGDTMFAAATGDKPQEGGAHFAELCYLATIVMARAVARGVYEATALPVDGAQRAYRDIHGRGF GT:EXON 1|1-334:0| BL:SWS:NREP 1 BL:SWS:REP 1->138,233->282|Y1167_MYCLE|2e-11|58.0|183/362| SEG 146->158|gtagagtgattat| SEG 161->173|gglgsasaissgg| RP:PDB:NREP 1 RP:PDB:REP 6->317|2drhB|2e-14|21.4|280/353| RP:PFM:NREP 1 RP:PFM:REP 6->283|PF03576|3e-28|46.3|259/307|Peptidase_S58| HM:PFM:NREP 1 HM:PFM:REP 5->321|PF03576|1.9e-76|37.3|292/326|Peptidase_S58| RP:SCP:NREP 1 RP:SCP:REP 1->334|1b65A|4e-26|20.7|305/363|d.154.1.1| HM:SCP:REP 1->332|1b65A_|5.1e-71|41.4|307/367|d.154.1.1|1/1|DmpA/ArgJ-like| OP:NHOMO 156 OP:NHOMOORG 154 OP:PATTERN -------1----1-1----------------------------------------------------- --1---1111-1-11--11-11111111111111111111-1-----1----1-1--1-------11111----------1-1-----------------------------------------------------11111----1---------------------------------------111---------------------------------2---------2--------------------------------------------------------------------------------------------1----------1-1-1111111---1-111---------1----1----1--1111-----111111111111111111111111-11111111111-11111111111111111111----111-----------1--1-----------------------------------1----------------------------------------1111---11-----------------------1-----------------------------1----------------------------------------------------------------------------------------------------------------11-----------------1-------------------------------------------------------------------------1--------------------------------------------------1--------------------------------------------1---------- -------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 312 STR:RPRED 93.4 SQ:SECSTR #####ccGGGcTTcEEEEEEEEEEEEEEEEEEcccccTTTEEEEEEEcccccccHHHHHHHcEEcccEEEEEGGGHHHHHHHHHHHHHHHcTTcTTTcccTccccccEEEEEccTTTccGGGccccccHHHHHHHHHHccccccccccGGGTTcEETTEEEEEEEEEEETTEEEEEEEEEEEccccGGGcccTTccHHHHTTTcccccccGGGcccTTccHHHHTTTccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHTTccccTTTccEEEEEEEEEEEEETTccccHHHHHHHHHHHHHHHHHHHHHcccE################# DISOP:02AL 1-3,219-227,334-335| PSIPRED cccccccccccccEEEEEEEEcccccccEEEEcccccEEEEEEcccccccccccEEEEcccEEEEccEEEEccccHHHHHHHHHHHHHHHcccEEcccccEEEEEcccEEEEcccccccccccccccHHHHHHHHHccccccccccccccccccEEccEEccccEEEEEEcccEEEEEEEEEcccccccccccccEEEccccccHHHccccccHHHcccHHccccccccccccEEEEEEEcccccHHHHHHHHHHHcccccccEEcccccccccEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHcccccc //