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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88308.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
:279 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   105->152 2vk9A PDBj 5e-04 27.1 %
:RPS:PFM   60->205 PF05704 * Caps_synth 1e-04 25.5 %
:HMM:PFM   124->155 PF04488 * Gly_transf_sug 1e-08 37.5 32/105  
:BLT:SWISS 66->231 YD6B_SCHPO 7e-10 31.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88308.2 GT:GENE AAK88308.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION complement(2560092..2560931) GB:FROM 2560092 GB:TO 2560931 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK88308.2 GB:DB_XREF GI:159140538 LENGTH 279 SQ:AASEQ MGERTVLGLPRRLHAARLRLAKAEGDLVARIGYQYTLVPPPDMLAKYTQFSAEDRRMINRKSREDVPRLIHQIWIGEKAPPISVKAWAAHAARHGYDYRLWREADLEREGVFSNAIFNRMLSEGDYPGAVDVARYILLERFGGIYLDCDWYPARDDRSFDAFVPLAGLTAFDEKTPRDTGQGSMLLANSFIAAPAGHPVFRKMLDSFPGIIEEMPRAPAWWSTGPLIFTVIARAGSISLAPASFVAVTLADRAPLEEVEAIRRELATQDSGMLIAWKSW GT:EXON 1|1-279:0| BL:SWS:NREP 1 BL:SWS:REP 66->231|YD6B_SCHPO|7e-10|31.8|151/356| SEG 9->23|lprrlhaarlrlaka| BL:PDB:NREP 1 BL:PDB:REP 105->152|2vk9A|5e-04|27.1|48/540| RP:PFM:NREP 1 RP:PFM:REP 60->205|PF05704|1e-04|25.5|141/259|Caps_synth| HM:PFM:NREP 1 HM:PFM:REP 124->155|PF04488|1e-08|37.5|32/105|Gly_transf_sug| OP:NHOMO 9 OP:NHOMOORG 9 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------1-----11----------------------1--------------------------------------------------1--------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 48 STR:RPRED 17.2 SQ:SECSTR ########################################################################################################EGGGTTcccHHHHHHHHTcccHHHHHHHHHHHHHHHHcEEEEcTTccc############################################################################################################################### DISOP:02AL 1-2| PSIPRED cccccEEccHHHHHHHHHHHHHHcccHHHHHcccEEEccccccccccccccccccHHHccccccccccEEEEEcccccccHHHHHHHHHHccccccEEEEEEHHHHHHHHHHHcHHHHHHHHHHHccHHHHHHHHHHHHHHccEEEEEEEEEccccccHHHcccccccccccccccccccccccEEEEEEEEEccccHHHHHHHHHHHHHHccccccccccccccEEEEEEEccccccccccccEEccHHHcccHHHHHHHHHHEEEccccEEEEEccc //