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Agrobacterium tumefaciens str. C58 (atum0)
Chromosome : circular
Gene : AAK88313.2
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  44/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:402 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   9->360 3d0rB PDBj 2e-06 15.0 %
:RPS:SCOP  213->387 1f0kA  c.87.1.2 * 6e-16 20.1 %
:HMM:SCOP  212->396 1f0kA_ c.87.1.2 * 9.9e-12 19.3 %
:RPS:PFM   275->360 PF04101 * Glyco_tran_28_C 1e-06 31.8 %
:HMM:PFM   227->360 PF04101 * Glyco_tran_28_C 1.9e-11 21.5 130/167  
:BLT:SWISS 19->337 Y1255_METJA 1e-10 27.0 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID AAK88313.2 GT:GENE AAK88313.2 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00072CH01 GT:ORG atum0 GB:ACCESSION GIB00072CH01 GB:CHROMOSOME circular GB:LOCATION 2567299..2568507 GB:FROM 2567299 GB:TO 2568507 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID AAK88313.2 GB:DB_XREF GI:159140541 LENGTH 402 SQ:AASEQ MSPRLNDARILMYSHDSFGLGHLRRCRTIAHALVEDYRGLNVLIISGATIAGAFDYRARVDFVKIPSVIKLRNGEYTSMDRHIDLQETLKMRRSIIYHTAESFQPDIFIVDKEPMGLRGEVEETLAYLKGQGTKLVIGLRDVMDAPQLLEAEWKRNNVMTKIGQFYDHVWVYGPPDFHDPLTGLDVPQTVRDKMDFVGFLQRSKTQAETVAHRPEGDYLLITTGGGGDGSELIDDVINAYHHDPELTHKALVVLGPYMPADQRQRFMSSVADIPHIEIIEFDNRMEDLVAGAQAVVSMGGYNTVCEILSFDKPALVVPRTVPREEQLIRATRASELGLFDMLLPEDAENPAKMAEALKALPNRAPPSVNSQNLKLDGLENISRRIAEWLPHESEKAPITLTA GT:EXON 1|1-402:0| BL:SWS:NREP 1 BL:SWS:REP 19->337|Y1255_METJA|1e-10|27.0|289/394| RP:PDB:NREP 1 RP:PDB:REP 9->360|3d0rB|2e-06|15.0|334/381| RP:PFM:NREP 1 RP:PFM:REP 275->360|PF04101|1e-06|31.8|85/162|Glyco_tran_28_C| HM:PFM:NREP 1 HM:PFM:REP 227->360|PF04101|1.9e-11|21.5|130/167|Glyco_tran_28_C| GO:PFM:NREP 4 GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF04101|IPR007235| GO:PFM GO:0016758|"GO:transferase activity, transferring hexosyl groups"|PF04101|IPR007235| GO:PFM GO:0030246|"GO:carbohydrate binding"|PF04101|IPR007235| GO:PFM GO:0030259|"GO:lipid glycosylation"|PF04101|IPR007235| RP:SCP:NREP 1 RP:SCP:REP 213->387|1f0kA|6e-16|20.1|169/351|c.87.1.2| HM:SCP:REP 212->396|1f0kA_|9.9e-12|19.3|181/0|c.87.1.2|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 62 OP:NHOMOORG 44 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------1-1---------------------------------------------------------------------------------------------------31--11-----------11-213---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--1-1-2--211221211222-----1------111--------1------------------------------------------------------------------------------------------------------------------21-1-31-12--------------------2-------------------------11---------------------------------------------------------------------------------------------------------------------------------------------------11---------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 340 STR:RPRED 84.6 SQ:SECSTR ########EEEEEccccTTTTccGGGHHHHHHHHH##TTcEEEEEHHTTTccEEEccTTccHHHHHHHHHHHcTTcTTTGGGcccccGGGGHHHHHHHHHHHHHHHHHHHHHHcccEEEEETTcHHHHHHHHHHTccEEEEcccccccTTHHHHHHTTcHHHHHHHTcccccccEEEEcccGGGcccccTTEEEcccccccccccccccccccccccEEEEEccHHHHHHHcGGGGHHHHHHHTTccccEEEEcTTcccGGGccccT###cccTTEEEccccc#HHHHHTTEEEEEEcccTTHHHHHHHHTccEEEcccT###TccccHHHHHHHHH###HTcEEEccGGGccHHHHHHH########################################## DISOP:02AL 1-6,8-8,367-375,396-403| PSIPRED ccccccccEEEEEEccccccccHHHHHHHHHHHHHcccccEEEEEccHHHHHHccccccccEEEccccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccEEEEccEEHHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHccccccccccEEEEccccccccccccccccccccEEEEEEcccccHHHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHccEEEEcccHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHcccEEEEEcHHcccHHHHHHHHHHHHccHHHHHHHHHHccccHHHHHHHHHHHHHHHHccccccccc //